Gene
RNA
| Item | Value |
|---|---|
| gene id | G421905 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 5029037 ~ 5029363 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU484551 | True | 327 | lncRNA | 0.37 | 1 | 5029037 | 5029363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_04935603_04968053 | HSDL2 | coding | downstream | 60735 | 4935502 ~ 4968302 (-) |
| CI01000304_04914520_04932141 | KIAA1958, E130308A19RIK, RGD1310951 | coding | downstream | 96896 | 4914520 ~ 4932141 (-) |
| CI01000304_04894865_04896532 | CSN4, COPS4 | coding | downstream | 132332 | 4894865 ~ 4896705 (-) |
| CI01000304_04809176_04857217 | CWC27 | coding | downstream | 171820 | 4809176 ~ 4857217 (-) |
| CI01000304_04789939_04792844 | NA | coding | downstream | 236193 | 4789439 ~ 4792844 (-) |
| CI01000304_05039292_05067803 | UGCG | coding | upstream | 9623 | 5038986 ~ 5067814 (-) |
| CI01000304_05098315_05108511 | CDC37L1 | coding | upstream | 68274 | 5097637 ~ 5108511 (-) |
| CI01000304_05139300_05146419 | NA | coding | upstream | 109760 | 5139123 ~ 5146728 (-) |
| CI01000304_05194636_05197677 | NA | coding | upstream | 165265 | 5194628 ~ 5197867 (-) |
| CI01000304_05199154_05201984 | PTGDSA | coding | upstream | 169612 | 5198975 ~ 5203006 (-) |
| G421891 | NA | non-coding | downstream | 84691 | 4944131 ~ 4944346 (-) |
| G421890 | NA | non-coding | downstream | 85035 | 4943791 ~ 4944002 (-) |
| G421884 | NA | non-coding | downstream | 120098 | 4908430 ~ 4908939 (-) |
| G421875 | NA | non-coding | downstream | 143264 | 4885574 ~ 4885773 (-) |
| G421860 | NA | non-coding | downstream | 248542 | 4780181 ~ 4780495 (-) |
| G421906 | NA | non-coding | upstream | 47 | 5029410 ~ 5029694 (-) |
| G421907 | NA | non-coding | upstream | 851 | 5030214 ~ 5030946 (-) |
| G421545 | NA | non-coding | upstream | 7861 | 5037224 ~ 5038690 (-) |
| G421952 | NA | non-coding | upstream | 148222 | 5177585 ~ 5177800 (-) |
| G421961 | NA | non-coding | upstream | 199873 | 5229236 ~ 5229474 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | downstream | 356090 | 4661766 ~ 4672947 (-) |
| CI01000304_04263955_04264962 | NA | other | downstream | 763836 | 4263846 ~ 4265201 (-) |
| G419354 | NA | other | downstream | 2762796 | 2262502 ~ 2266241 (-) |
| G419353 | NA | other | downstream | 2792931 | 2229384 ~ 2236106 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 1448088 | 6480743 ~ 6483986 (-) |
| G422354 | NA | other | upstream | 1601723 | 6631086 ~ 6631499 (-) |
| G422378 | NA | other | upstream | 1715316 | 6744679 ~ 6783046 (-) |
| G422810 | NA | other | upstream | 2600796 | 7630159 ~ 7652703 (-) |
| G423386 | NA | other | upstream | 3832860 | 8862223 ~ 8865296 (-) |
