G420600


Basic Information

Item Value
gene id G420600
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 5067544 ~ 5078275 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483092
ACCCATCCGCAGCGCGCCGCGTCAGACTACAACGCTCCCGTTACAATCAACTAAATCTGTCTACACTGCAAGCTCGCGATCAGCGTCGTTGAATATAACGGAAGCGTTCTGAGCGTCGCGTTTCATGGTCTCTTTCAAATCAATGATGCCGCATTTACTTACACGTAGATGATGGACACGAGGTGCATGAGCCATAGGACGATAAACAATAGAAATCCGAAGATGGAGAACCCTTGCAAGGCTAGATCGAGCAGGGCCATGGCTGTCCTGTGTCCGGATGCGCTGACACCTCAGTGTTCGGCCCTTATGCTGAAAGCTTTCACACATTCAGATGACTGAGTTGAGCGGGCGGGTCTGCAGGGAATCAGCGCATAGCAGAGTGACATCACTTCTCTTCTCTGATGACGTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483092 True 412 lncRNA 0.51 2 5067544 5078275

Neighbor

gene id symbol gene type direction distance location
CI01000304_04989817_04997932 NA coding upstream 69612 4988362 ~ 4997932 (+)
CI01000304_04902333_04911640 LIN54 coding upstream 155766 4900215 ~ 4911778 (+)
CI01000304_04876496_04883240 NA coding upstream 183842 4876336 ~ 4883702 (+)
CI01000304_04866074_04866590 PLAC8.1 coding upstream 200474 4864986 ~ 4867070 (+)
CI01000304_04708075_04768393 ADAMTS6 coding upstream 298963 4707405 ~ 4768581 (+)
CI01000304_05085761_05095609 AK3 coding downstream 7321 5085596 ~ 5096251 (+)
CI01000304_05122605_05137890 EXD3 coding downstream 44330 5122605 ~ 5138169 (+)
CI01000304_05149465_05165999 NA coding downstream 70422 5148697 ~ 5166172 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB coding downstream 95402 5173426 ~ 5176791 (+)
CI01000304_05277392_05292162 DBH coding downstream 198826 5277101 ~ 5292162 (+)
G420530 NA non-coding upstream 28882 5037371 ~ 5038662 (+)
G420747 NA non-coding upstream 30488 5036696 ~ 5037056 (+)
G420746 NA non-coding upstream 30924 5036395 ~ 5036620 (+)
G420544 NA non-coding upstream 124025 4940767 ~ 4943519 (+)
G420548 NA non-coding upstream 135429 4931127 ~ 4932115 (+)
G420517 NA non-coding downstream 112329 5190604 ~ 5197784 (+)
G420538 NA non-coding downstream 123997 5202272 ~ 5206967 (+)
G420785 NA non-coding downstream 129035 5207310 ~ 5207655 (+)
G420786 NA non-coding downstream 129428 5207703 ~ 5207923 (+)
G420787 NA non-coding downstream 130499 5208774 ~ 5209519 (+)
G420445 NA other upstream 763712 4303336 ~ 4303832 (+)
G418981 NA other upstream 2973866 2092494 ~ 2093678 (+)
G418116 NA other upstream 4192295 872670 ~ 875249 (+)
G418059 NA other upstream 4503093 558092 ~ 564451 (+)
G417987 NA other upstream 4839691 226703 ~ 227853 (+)
G421162 NA other downstream 1162958 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 2274374 7352621 ~ 7354396 (+)
G421435 NA other downstream 2405866 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 2900353 7979078 ~ 7980735 (+)

Expression


Co-expression Network