G420792


Basic Information

Item Value
gene id G420792
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 5228264 ~ 5228498 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483290
CACAAATGAAGACATTATCACAAAAAAGATATTTTAAATGAAATCAGAGATTTCGGTCTCTCAATTGACAGTCCACGCAACTACCATTGTTGCTTCAAAAAGTTCAAGAATTTGAGACTTCAAGATTCGAGATCGTAAAATTAACCCATATGAATCGAGCAGTTTAGTCTAAATTCTAGATTGAATTTAGGCTTTTATTCACATTTAAACACTGATCAGCGAACATACACAGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483290 True 235 lncRNA 0.33 1 5228264 5228498

Neighbor

gene id symbol gene type direction distance location
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB coding upstream 52739 5173426 ~ 5176791 (+)
CI01000304_05149465_05165999 NA coding upstream 62092 5148697 ~ 5166172 (+)
CI01000304_05122605_05137890 EXD3 coding upstream 90095 5122605 ~ 5138169 (+)
CI01000304_05085761_05095609 AK3 coding upstream 132013 5085596 ~ 5096251 (+)
CI01000304_04989817_04997932 NA coding upstream 230332 4988362 ~ 4997932 (+)
CI01000304_05277392_05292162 DBH coding downstream 48603 5277101 ~ 5292162 (+)
CI01000304_05394708_05400373 NA coding downstream 165354 5393852 ~ 5400616 (+)
CI01000304_05489571_05504308 NA coding downstream 261027 5489525 ~ 5508080 (+)
CI01000304_05541965_05547732 NA coding downstream 313040 5541538 ~ 5547877 (+)
CI01000304_05584729_05612753 STRBP coding downstream 356231 5584729 ~ 5612798 (+)
G420550 NA non-coding upstream 796 5226778 ~ 5227468 (+)
G420621 NA non-coding upstream 1830 5226136 ~ 5226434 (+)
G420558 NA non-coding upstream 2328 5225653 ~ 5225936 (+)
G420541 NA non-coding upstream 8313 5219582 ~ 5219951 (+)
G420791 NA non-coding upstream 9184 5218669 ~ 5219080 (+)
G420793 NA non-coding downstream 532 5229030 ~ 5229292 (+)
G420795 NA non-coding downstream 2813 5231311 ~ 5231737 (+)
G420824 NA non-coding downstream 66142 5294640 ~ 5295422 (+)
G420835 NA non-coding downstream 160152 5388650 ~ 5389326 (+)
G420445 NA other upstream 924432 4303336 ~ 4303832 (+)
G418981 NA other upstream 3134586 2092494 ~ 2093678 (+)
G418116 NA other upstream 4353015 872670 ~ 875249 (+)
G418059 NA other upstream 4663813 558092 ~ 564451 (+)
G421162 NA other downstream 1012735 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 2124151 7352621 ~ 7354396 (+)
G421435 NA other downstream 2255643 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 2750130 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 3003496 8231293 ~ 8235655 (+)

Expression


Co-expression Network