Gene
RNA
| Item | Value |
|---|---|
| gene id | G421961 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 5229236 ~ 5229474 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU484608 | True | 239 | lncRNA | 0.32 | 1 | 5229236 | 5229474 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_05206827_05224699 | SLC27A4 | coding | downstream | 4537 | 5206577 ~ 5224699 (-) |
| CI01000304_05199154_05201984 | PTGDSA | coding | downstream | 26230 | 5198975 ~ 5203006 (-) |
| CI01000304_05194636_05197677 | NA | coding | downstream | 31369 | 5194628 ~ 5197867 (-) |
| CI01000304_05139300_05146419 | NA | coding | downstream | 82508 | 5139123 ~ 5146728 (-) |
| CI01000304_05098315_05108511 | CDC37L1 | coding | downstream | 120725 | 5097637 ~ 5108511 (-) |
| CI01000304_05231085_05231758 | NA | coding | upstream | 1064 | 5230538 ~ 5233753 (-) |
| CI01000304_05244209_05247428 | FAM163B | coding | upstream | 14410 | 5243884 ~ 5247428 (-) |
| CI01000304_05295266_05357773 | SARDH | coding | upstream | 65412 | 5294886 ~ 5357996 (-) |
| CI01000304_05363977_05376993 | CERCAM | coding | upstream | 133352 | 5362826 ~ 5377522 (-) |
| CI01000304_05389793_05390092 | NA | coding | upstream | 159965 | 5389439 ~ 5390678 (-) |
| G421952 | NA | non-coding | downstream | 51436 | 5177585 ~ 5177800 (-) |
| G421545 | NA | non-coding | downstream | 190546 | 5037224 ~ 5038690 (-) |
| G421907 | NA | non-coding | downstream | 198290 | 5030214 ~ 5030946 (-) |
| G421906 | NA | non-coding | downstream | 199542 | 5029410 ~ 5029694 (-) |
| G421905 | NA | non-coding | downstream | 199873 | 5029037 ~ 5029363 (-) |
| G421962 | NA | non-coding | upstream | 6 | 5229480 ~ 5229805 (-) |
| G421973 | NA | non-coding | upstream | 18873 | 5248347 ~ 5297279 (-) |
| G421993 | NA | non-coding | upstream | 148090 | 5377564 ~ 5377787 (-) |
| G422013 | NA | non-coding | upstream | 162937 | 5392411 ~ 5392939 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | downstream | 556289 | 4661766 ~ 4672947 (-) |
| CI01000304_04263955_04264962 | NA | other | downstream | 964035 | 4263846 ~ 4265201 (-) |
| G419354 | NA | other | downstream | 2962995 | 2262502 ~ 2266241 (-) |
| G419353 | NA | other | downstream | 2993130 | 2229384 ~ 2236106 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 1247977 | 6480743 ~ 6483986 (-) |
| G422354 | NA | other | upstream | 1401612 | 6631086 ~ 6631499 (-) |
| G422378 | NA | other | upstream | 1515205 | 6744679 ~ 6783046 (-) |
| G422810 | NA | other | upstream | 2400685 | 7630159 ~ 7652703 (-) |
| G423386 | NA | other | upstream | 3632749 | 8862223 ~ 8865296 (-) |
