G420886


Basic Information

Item Value
gene id G420886
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 5489984 ~ 5490217 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483388
TTCACCTGATGGAGTTTGGGTTCCTTGCCGCTGTCGCCTCTGGCTTGCTTAGTTGGGGACACTTGACTTGACATTTGATATTCAACAGTGCTTTGATCTGCCTGCATTGACACTATTCTTTAAGAGCTGCTGTGCAGCCAAACAATGTACCAGTTATCAATGTAAAGCTGCTTTGACACAATCTACATTGTAAAAAGCACTATATAAATAAAGGTGACTTGACTTGACTTGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483388 True 234 lncRNA 0.41 1 5489984 5490217

Neighbor

gene id symbol gene type direction distance location
CI01000304_05394708_05400373 NA coding upstream 89368 5393852 ~ 5400616 (+)
CI01000304_05277392_05292162 DBH coding upstream 197822 5277101 ~ 5292162 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB coding upstream 314459 5173426 ~ 5176791 (+)
CI01000304_05149465_05165999 NA coding upstream 323812 5148697 ~ 5166172 (+)
CI01000304_05122605_05137890 EXD3 coding upstream 351815 5122605 ~ 5138169 (+)
CI01000304_05541965_05547732 NA coding downstream 51321 5541538 ~ 5547877 (+)
CI01000304_05584729_05612753 STRBP coding downstream 94512 5584729 ~ 5612798 (+)
CI01000304_05828658_05832773 MORN5 coding downstream 338441 5828658 ~ 5832803 (+)
CI01000304_05880320_05907760 NA coding downstream 389938 5880155 ~ 5907760 (+)
CI01000304_05931192_05933816 NA coding downstream 440975 5931192 ~ 5933816 (+)
G420881 NA non-coding upstream 8828 5480874 ~ 5481156 (+)
G420879 NA non-coding upstream 11312 5478363 ~ 5478672 (+)
G420835 NA non-coding upstream 100658 5388650 ~ 5389326 (+)
G420824 NA non-coding upstream 194562 5294640 ~ 5295422 (+)
CI01000304_05489571_05504308 NA non-coding downstream 9169 5489525 ~ 5508080 (+)
G420892 NA non-coding downstream 92383 5582600 ~ 5639159 (+)
G420888 NA non-coding downstream 199817 5690034 ~ 5759320 (+)
G421000 NA non-coding downstream 295487 5785704 ~ 5785928 (+)
G421006 NA non-coding downstream 327002 5817219 ~ 5817554 (+)
G420445 NA other upstream 1186152 4303336 ~ 4303832 (+)
G418981 NA other upstream 3396306 2092494 ~ 2093678 (+)
G418116 NA other upstream 4614735 872670 ~ 875249 (+)
G418059 NA other upstream 4925533 558092 ~ 564451 (+)
G421162 NA other downstream 751016 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 1862432 7352621 ~ 7354396 (+)
G421435 NA other downstream 1993924 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 2488411 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 2741777 8231293 ~ 8235655 (+)

Expression


Co-expression Network