Gene
RNA
| Item | Value |
|---|---|
| gene id | G422228 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 6227989 ~ 6228259 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU484918 | True | 271 | lncRNA | 0.38 | 1 | 6227989 | 6228259 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_06222605_06223109 | NA | coding | downstream | 3715 | 6221146 ~ 6224274 (-) |
| CI01000304_06204719_06212827 | NA | coding | downstream | 14813 | 6204106 ~ 6213176 (-) |
| CI01000304_06123328_06162242 | ITGA1 | coding | downstream | 65747 | 6120800 ~ 6162242 (-) |
| CI01000304_06092291_06110594 | ITGA2 | coding | downstream | 117345 | 6091994 ~ 6110644 (-) |
| CI01000304_06063226_06079147 | ITGA2.2 | coding | downstream | 148842 | 6063226 ~ 6079147 (-) |
| CI01000304_06234231_06236303 | NA | coding | upstream | 5946 | 6234205 ~ 6236409 (-) |
| CI01000304_06240590_06242902 | APLNRB | coding | upstream | 12207 | 6240466 ~ 6243012 (-) |
| CI01000304_06270879_06289706 | TBC1D10AB | coding | upstream | 40934 | 6267565 ~ 6290510 (-) |
| CI01000304_06300308_06314871 | PPTC7A, PPTC7B, PPTC7.S, PPTC7 | coding | upstream | 70446 | 6298705 ~ 6315061 (-) |
| CI01000304_06324113_06327228 | HVCN1 | coding | upstream | 95832 | 6324091 ~ 6328179 (-) |
| G422227 | NA | non-coding | downstream | 162 | 6227526 ~ 6227827 (-) |
| G422217 | NA | non-coding | downstream | 39979 | 6187732 ~ 6188010 (-) |
| G422214 | NA | non-coding | downstream | 45556 | 6182133 ~ 6182433 (-) |
| G422164 | NA | non-coding | downstream | 115550 | 6060806 ~ 6112439 (-) |
| G422229 | NA | non-coding | upstream | 281 | 6228540 ~ 6228897 (-) |
| G422231 | NA | non-coding | upstream | 2683 | 6230942 ~ 6231168 (-) |
| G422232 | NA | non-coding | upstream | 2963 | 6231222 ~ 6231467 (-) |
| G422240 | NA | non-coding | upstream | 35503 | 6263762 ~ 6264045 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | downstream | 1555042 | 4661766 ~ 4672947 (-) |
| CI01000304_04263955_04264962 | NA | other | downstream | 1962788 | 4263846 ~ 4265201 (-) |
| G419354 | NA | other | downstream | 3961748 | 2262502 ~ 2266241 (-) |
| G419353 | NA | other | downstream | 3991883 | 2229384 ~ 2236106 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 249192 | 6480743 ~ 6483986 (-) |
| G422354 | NA | other | upstream | 402827 | 6631086 ~ 6631499 (-) |
| G422378 | NA | other | upstream | 516420 | 6744679 ~ 6783046 (-) |
| G422810 | NA | other | upstream | 1401900 | 7630159 ~ 7652703 (-) |
| G423386 | NA | other | upstream | 2633964 | 8862223 ~ 8865296 (-) |
