G421182


Basic Information

Item Value
gene id G421182
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6293404 ~ 6293618 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483730
GTGTAAGTGTGTAACAGGCAGGAAGTGTTTCATCTAAACAAATGAATGCAGCTTTGCAGACTGTGCCCCAAATGTAACGGTTTGCAGGCTCTGTCCACTCTTCACTGTCTTTCACGTGTAAGTGAGTGTGACAGGAGAGAGATTTCCAGAGGGCTGAGATGAGCAGTGTTCACCCTCTTTTCTCTCACAGCCACGTGCTGCAGCTCCAATAAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483730 True 215 lncRNA 0.48 1 6293404 6293618

Neighbor

gene id symbol gene type direction distance location
CI01000304_06215366_06219149 GOLPH3 coding upstream 73664 6215095 ~ 6219740 (+)
CI01000304_06052958_06060880 MOCS2 coding upstream 232471 6052958 ~ 6060933 (+)
CI01000304_06006140_06015169 ARL15, ARL15B coding upstream 277602 6006086 ~ 6015802 (+)
CI01000304_05965390_05976384 NA coding upstream 316264 5965221 ~ 5980978 (+)
CI01000304_05934136_05935124 NA coding upstream 357617 5934136 ~ 5935787 (+)
CI01000304_06315989_06316538 NA coding downstream 21815 6315433 ~ 6316538 (+)
CI01000304_06317696_06323233 NA coding downstream 24078 6317696 ~ 6323827 (+)
CI01000304_06331541_06373056 CSGALNACT1A, CSGALNACT1 coding downstream 37598 6331216 ~ 6373208 (+)
CI01000304_06384004_06392366 NA coding downstream 90386 6384004 ~ 6392743 (+)
CI01000304_06434499_06453808 DHX29 coding downstream 140881 6434499 ~ 6453906 (+)
G421124 NA non-coding upstream 23645 6267568 ~ 6269759 (+)
G421156 NA non-coding upstream 60973 6232134 ~ 6232431 (+)
G421142 NA non-coding upstream 105655 6187297 ~ 6187749 (+)
G420977 NA non-coding upstream 170042 6120792 ~ 6123362 (+)
G421069 NA non-coding upstream 174671 6118524 ~ 6118733 (+)
G421184 NA non-coding downstream 1842 6295460 ~ 6295825 (+)
G421131 NA non-coding downstream 10457 6304075 ~ 6309660 (+)
G421201 NA non-coding downstream 182611 6476229 ~ 6476435 (+)
G421202 NA non-coding downstream 183061 6476679 ~ 6476903 (+)
G421203 NA non-coding downstream 183536 6477154 ~ 6477391 (+)
G421162 NA other upstream 50407 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1116613 5173426 ~ 5176791 (+)
G420445 NA other upstream 1989572 4303336 ~ 4303832 (+)
G418981 NA other upstream 4199726 2092494 ~ 2093678 (+)
G418116 NA other upstream 5418155 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 1059031 7352621 ~ 7354396 (+)
G421435 NA other downstream 1190523 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 1685010 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1938376 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 2378152 8671770 ~ 8672555 (+)

Expression


Co-expression Network