G421184


Basic Information

Item Value
gene id G421184
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6295460 ~ 6295825 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483732
CACCCTGTAGCCCAAGACTGGTTGCCCACTGAAGCTAAGCAGGGCTGAGCCTGGTTAGTACCTGGATGGGAGACCTTCTGGGAAAACTAGGTTGCTGCTGGAAGAGGTGTTAGTGAGGCCAGCAGGGGGTGCTCACCCTGTAGTCTGATGGGGACACTATACTGTCAAAAAGCACCGTCCTTCGGATGAGAAGTTAAACCAAGGTCCTGACTCTCTGTGGTCATTCAAAATCCCAGGATGTCCTTCGAAAAGAGTAGGGGTGTAACCCAGACATCCTGGCCAAATTTGCCCATTGGCCTCAGTCCATCATGGCCTCCTAATCCTCCCCATATACTGATTGGCTTCATCACTCTGTCTCCTCTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483732 True 366 lncRNA 0.52 1 6295460 6295825

Neighbor

gene id symbol gene type direction distance location
CI01000304_06215366_06219149 GOLPH3 coding upstream 75720 6215095 ~ 6219740 (+)
CI01000304_06052958_06060880 MOCS2 coding upstream 234527 6052958 ~ 6060933 (+)
CI01000304_06006140_06015169 ARL15, ARL15B coding upstream 279658 6006086 ~ 6015802 (+)
CI01000304_05965390_05976384 NA coding upstream 318320 5965221 ~ 5980978 (+)
CI01000304_05934136_05935124 NA coding upstream 359673 5934136 ~ 5935787 (+)
CI01000304_06315989_06316538 NA coding downstream 19608 6315433 ~ 6316538 (+)
CI01000304_06317696_06323233 NA coding downstream 21871 6317696 ~ 6323827 (+)
CI01000304_06331541_06373056 CSGALNACT1A, CSGALNACT1 coding downstream 35391 6331216 ~ 6373208 (+)
CI01000304_06384004_06392366 NA coding downstream 88179 6384004 ~ 6392743 (+)
CI01000304_06434499_06453808 DHX29 coding downstream 138674 6434499 ~ 6453906 (+)
G421182 NA non-coding upstream 1842 6293404 ~ 6293618 (+)
G421124 NA non-coding upstream 25701 6267568 ~ 6269759 (+)
G421156 NA non-coding upstream 63029 6232134 ~ 6232431 (+)
G421142 NA non-coding upstream 107711 6187297 ~ 6187749 (+)
G420977 NA non-coding upstream 172098 6120792 ~ 6123362 (+)
G421131 NA non-coding downstream 8250 6304075 ~ 6309660 (+)
G421201 NA non-coding downstream 180404 6476229 ~ 6476435 (+)
G421202 NA non-coding downstream 180854 6476679 ~ 6476903 (+)
G421203 NA non-coding downstream 181329 6477154 ~ 6477391 (+)
G421204 NA non-coding downstream 199833 6495658 ~ 6495882 (+)
G421162 NA other upstream 52463 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1118669 5173426 ~ 5176791 (+)
G420445 NA other upstream 1991628 4303336 ~ 4303832 (+)
G418981 NA other upstream 4201782 2092494 ~ 2093678 (+)
G418116 NA other upstream 5420211 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 1056824 7352621 ~ 7354396 (+)
G421435 NA other downstream 1188316 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 1682803 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1936169 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 2375945 8671770 ~ 8672555 (+)

Expression


Co-expression Network