G421204


Basic Information

Item Value
gene id G421204
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6495658 ~ 6495882 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483752
GTAAATGCAGGATAAAGGCAATTGATCACGTGGTTTAGCCAGTTTTCTGAAGTGATTCAATTTATTTTTGGTGAAAACGCATTTTTTACAAGTAACATCTTGCAATTGCAGTCTCTAATTTGTTGTCCTTTGGTTTGATATTTTGACATCAGACAAATTTGATCTTTAATTGTACCTTTATGTTCCTTTTGGAGCTTGAAGGTTTGGTCCCCATTGGTCTTCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483752 True 225 lncRNA 0.35 1 6495658 6495882

Neighbor

gene id symbol gene type direction distance location
CI01000304_06434499_06453808 DHX29 coding upstream 41752 6434499 ~ 6453906 (+)
CI01000304_06384004_06392366 NA coding upstream 102915 6384004 ~ 6392743 (+)
CI01000304_06331541_06373056 CSGALNACT1A, CSGALNACT1 coding upstream 122450 6331216 ~ 6373208 (+)
CI01000304_06317696_06323233 NA coding upstream 171831 6317696 ~ 6323827 (+)
CI01000304_06315989_06316538 NA coding upstream 179120 6315433 ~ 6316538 (+)
CI01000304_06496953_06504096 NA coding downstream 608 6496490 ~ 6504793 (+)
CI01000304_06523767_06526359 NA coding downstream 27823 6523705 ~ 6526427 (+)
CI01000304_06529800_06545548 ATP6V0A2A coding downstream 33918 6529800 ~ 6546501 (+)
CI01000304_06547442_06555032 NA coding downstream 51560 6547442 ~ 6555367 (+)
CI01000304_06556398_06582069 OSBP2 coding downstream 60223 6556105 ~ 6583204 (+)
G421203 NA non-coding upstream 18267 6477154 ~ 6477391 (+)
G421202 NA non-coding upstream 18755 6476679 ~ 6476903 (+)
G421201 NA non-coding upstream 19223 6476229 ~ 6476435 (+)
G421131 NA non-coding upstream 185998 6304075 ~ 6309660 (+)
G421184 NA non-coding upstream 199833 6295460 ~ 6295825 (+)
G421211 NA non-coding downstream 63600 6559482 ~ 6559828 (+)
G421217 NA non-coding downstream 77662 6573544 ~ 6574011 (+)
G421122 NA non-coding downstream 134706 6630588 ~ 6630875 (+)
G421121 NA non-coding downstream 135182 6631064 ~ 6631497 (+)
G421227 NA non-coding downstream 184021 6679903 ~ 6680219 (+)
G421162 NA other upstream 252661 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1318867 5173426 ~ 5176791 (+)
G420445 NA other upstream 2191826 4303336 ~ 4303832 (+)
G418981 NA other upstream 4401980 2092494 ~ 2093678 (+)
G418116 NA other upstream 5620409 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 856767 7352621 ~ 7354396 (+)
G421435 NA other downstream 988259 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 1482746 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1736112 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 2175888 8671770 ~ 8672555 (+)

Expression


Co-expression Network