G421211


Basic Information

Item Value
gene id G421211
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6559482 ~ 6559828 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483759
ATGACATAAATTGCATTAGTATCAAAGCAGGCAGATGCGTTGCTGGTGGACAAATTATTAATGTGGTGTTTAACACGTATATACTCTCACCCTTCATTAGCCAAAACTTTGACATGTTTGTAAACATACATAGGCTACCTGAAAGTGATGCACGGGATTCATCTTGGGCTTTTTTCTTTTTCGCTTCTCATCGCCAGACACACAGCTGTTGTATTTTCCCGGGCATAGTTGTCAGAAGTTGTCAGCCAGCAGCAAACATGAGGTGGGGCGGGGCGCGCGTGCGAGAATGAATGGCGTTTCGCGGAGGGAGGGCATCTGAACTCAACAAAGCCGACCTGATATATAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483759 True 347 lncRNA 0.46 1 6559482 6559828

Neighbor

gene id symbol gene type direction distance location
CI01000304_06547442_06555032 NA coding upstream 4115 6547442 ~ 6555367 (+)
CI01000304_06529800_06545548 ATP6V0A2A coding upstream 12981 6529800 ~ 6546501 (+)
CI01000304_06523767_06526359 NA coding upstream 33055 6523705 ~ 6526427 (+)
CI01000304_06496953_06504096 NA coding upstream 54689 6496490 ~ 6504793 (+)
CI01000304_06434499_06453808 DHX29 coding upstream 105576 6434499 ~ 6453906 (+)
CI01000304_06588229_06592354 SLC35E4 coding downstream 25672 6585500 ~ 6592363 (+)
CI01000304_06602474_06607571 SMTNA coding downstream 42646 6602474 ~ 6608377 (+)
CI01000304_06613743_06629298 INPP5J coding downstream 53069 6612897 ~ 6630337 (+)
CI01000304_06642935_06648881 MAT2AA, MAT2A, MAT2AB coding downstream 83107 6642935 ~ 6649779 (+)
CI01000304_06688651_06694097 LOX, LOXA coding downstream 128317 6688145 ~ 6695673 (+)
G421204 NA non-coding upstream 63600 6495658 ~ 6495882 (+)
G421203 NA non-coding upstream 82091 6477154 ~ 6477391 (+)
G421202 NA non-coding upstream 82579 6476679 ~ 6476903 (+)
G421201 NA non-coding upstream 83047 6476229 ~ 6476435 (+)
G421131 NA non-coding upstream 249822 6304075 ~ 6309660 (+)
G421217 NA non-coding downstream 13716 6573544 ~ 6574011 (+)
G421122 NA non-coding downstream 70760 6630588 ~ 6630875 (+)
G421121 NA non-coding downstream 71236 6631064 ~ 6631497 (+)
G421227 NA non-coding downstream 120075 6679903 ~ 6680219 (+)
G421133 NA non-coding downstream 124625 6684453 ~ 6686024 (+)
G421162 NA other upstream 316485 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1382691 5173426 ~ 5176791 (+)
G420445 NA other upstream 2255650 4303336 ~ 4303832 (+)
G418981 NA other upstream 4465804 2092494 ~ 2093678 (+)
G418116 NA other upstream 5684233 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 792821 7352621 ~ 7354396 (+)
G421435 NA other downstream 924313 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 1418800 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1672166 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 2111942 8671770 ~ 8672555 (+)

Expression


Co-expression Network