Gene
RNA
| Item | Value |
|---|---|
| gene id | G422355 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 6631651 ~ 6633786 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU485084 | False | 2065 | lncRNA | 0.31 | 2 | 6631651 | 6633735 |
| TU485086 | False | 1545 | lncRNA | 0.31 | 2 | 6631651 | 6633786 |
| TU485087 | True | 1971 | lncRNA | 0.31 | 3 | 6631651 | 6633735 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_06515961_06519125 | NA | coding | downstream | 112526 | 6515896 ~ 6519125 (-) |
| CI01000304_06507688_06509486 | NA | coding | downstream | 122029 | 6507542 ~ 6509622 (-) |
| CI01000304_06489010_06490993 | NA | coding | downstream | 139457 | 6488028 ~ 6492194 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | coding | downstream | 147665 | 6480743 ~ 6483986 (-) |
| CI01000304_06473293_06476260 | NA | coding | downstream | 155285 | 6473293 ~ 6476366 (-) |
| CI01000304_06659869_06667425 | NA | coding | upstream | 26038 | 6659824 ~ 6667499 (-) |
| CI01000304_06706476_06715064 | GGCX | coding | upstream | 72284 | 6706070 ~ 6715064 (-) |
| CI01000304_06725873_06727044 | NA | coding | upstream | 91913 | 6725699 ~ 6727044 (-) |
| CI01000304_06738434_06742551 | STOML2.L, STOML2, STML2 | coding | upstream | 104468 | 6738254 ~ 6742551 (-) |
| CI01000304_06867535_06870134 | NA | coding | upstream | 233331 | 6867117 ~ 6870134 (-) |
| G422353 | NA | non-coding | downstream | 776 | 6630578 ~ 6630875 (-) |
| G422343 | NA | non-coding | downstream | 19534 | 6611768 ~ 6612117 (-) |
| G422332 | NA | non-coding | downstream | 70934 | 6560486 ~ 6560717 (-) |
| G422331 | NA | non-coding | downstream | 71642 | 6559787 ~ 6560009 (-) |
| G422321 | NA | non-coding | downstream | 112206 | 6510991 ~ 6519445 (-) |
| G422357 | NA | non-coding | upstream | 2047 | 6635833 ~ 6636140 (-) |
| G422359 | NA | non-coding | upstream | 3440 | 6637226 ~ 6637448 (-) |
| G422373 | NA | non-coding | upstream | 53142 | 6686928 ~ 6687167 (-) |
| G422420 | NA | non-coding | upstream | 273599 | 6907385 ~ 6970870 (-) |
| G422429 | NA | non-coding | upstream | 338245 | 6972031 ~ 6972231 (-) |
| G422354 | NA | other | downstream | 152 | 6631086 ~ 6631499 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | downstream | 1958704 | 4661766 ~ 4672947 (-) |
| CI01000304_04263955_04264962 | NA | other | downstream | 2366450 | 4263846 ~ 4265201 (-) |
| G419354 | NA | other | downstream | 4365410 | 2262502 ~ 2266241 (-) |
| G422378 | NA | other | upstream | 110893 | 6744679 ~ 6783046 (-) |
| G422810 | NA | other | upstream | 996373 | 7630159 ~ 7652703 (-) |
| G423386 | NA | other | upstream | 2228437 | 8862223 ~ 8865296 (-) |
| CI01000304_09566730_09575706 | NA | other | upstream | 2934570 | 9566730 ~ 9575706 (-) |
| CI01000304_09737662_09738777 | NA | other | upstream | 3102960 | 9736746 ~ 9738777 (-) |
