G421280


Basic Information

Item Value
gene id G421280
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6897910 ~ 6902295 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483845
GTTTTATTTAACAAAATTCGGGAGGCGCACGTTCAGGTAATCAACCAATCAGTGCAAGAGGAAGCCGGTATATAAAGCCGTCTCTCACCTCTATCCCGCGACAAGTTTCACAGCATCCCTCCACCACCCCATCACCTCACTCTTGGCTGGTTTCTATCCCAGTTAAGGAGGGGGAGTACTCTGGGTTCGGGCCAAATTCCGAGCTCGGAGCCCTCCCCCGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483845 True 223 lncRNA 0.53 2 6897910 6902295

Neighbor

gene id symbol gene type direction distance location
CI01000304_06875225_06878962 NA coding upstream 18602 6873700 ~ 6879308 (+)
CI01000304_06864719_06866382 NA coding upstream 31465 6864719 ~ 6866445 (+)
CI01000304_06844730_06857162 ATP8B5B coding upstream 40677 6843662 ~ 6857233 (+)
CI01000304_06804498_06839363 UNC13BB, UNC13B coding upstream 58167 6803920 ~ 6839743 (+)
CI01000304_06772878_06775497 NA coding upstream 122146 6772878 ~ 6775764 (+)
CI01000304_06986969_07013827 NA coding downstream 84533 6986828 ~ 7015834 (+)
CI01000304_07024195_07048285 SLC5A1, SGLT1 coding downstream 121900 7024195 ~ 7048285 (+)
CI01000304_07154005_07160649 SPPL3 coding downstream 251710 7154005 ~ 7161125 (+)
CI01000304_07236677_07272874 KCNN2 coding downstream 333850 7236145 ~ 7272960 (+)
CI01000304_07288867_07299197 DRG1, DRG1.L coding downstream 386572 7288867 ~ 7299754 (+)
G421232 NA non-coding upstream 116110 6772124 ~ 6781800 (+)
G421108 NA non-coding upstream 171853 6713612 ~ 6726057 (+)
G421133 NA non-coding upstream 211886 6684453 ~ 6686024 (+)
G421227 NA non-coding upstream 217691 6679903 ~ 6680219 (+)
G421121 NA non-coding upstream 266413 6631064 ~ 6631497 (+)
G421260 NA non-coding downstream 11702 6913997 ~ 6925035 (+)
G421292 NA non-coding downstream 57193 6959488 ~ 6963143 (+)
G421297 NA non-coding downstream 69723 6972018 ~ 6972221 (+)
G421300 NA non-coding downstream 81254 6983549 ~ 6983816 (+)
G421310 NA non-coding downstream 178130 7080425 ~ 7097508 (+)
G421162 NA other upstream 654913 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1721119 5173426 ~ 5176791 (+)
G420445 NA other upstream 2594078 4303336 ~ 4303832 (+)
G418981 NA other upstream 4804232 2092494 ~ 2093678 (+)
G418116 NA other upstream 6022661 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 450354 7352621 ~ 7354396 (+)
G421435 NA other downstream 581846 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 1076333 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1329699 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1769475 8671770 ~ 8672555 (+)

Expression


Co-expression Network