Gene
RNA
| Item | Value |
|---|---|
| gene id | G422420 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 6907385 ~ 6970870 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU485166 | True | 261 | lncRNA | 0.46 | 2 | 6907385 | 6970870 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_06881372_06883185 | RNF208 | coding | downstream | 24200 | 6881054 ~ 6883185 (-) |
| CI01000304_06867535_06870134 | NA | coding | downstream | 37251 | 6867117 ~ 6870134 (-) |
| CI01000304_06738434_06742551 | STOML2.L, STOML2, STML2 | coding | downstream | 164834 | 6738254 ~ 6742551 (-) |
| CI01000304_06725873_06727044 | NA | coding | downstream | 180341 | 6725699 ~ 6727044 (-) |
| CI01000304_06706476_06715064 | GGCX | coding | downstream | 192321 | 6706070 ~ 6715064 (-) |
| CI01000304_07051182_07056250 | NA | coding | upstream | 80258 | 7051128 ~ 7056250 (-) |
| CI01000304_07065444_07081535 | GNAZ | coding | upstream | 94349 | 7065219 ~ 7081970 (-) |
| CI01000304_07183432_07198305 | NT5C2L1 | coding | upstream | 211752 | 7182622 ~ 7198305 (-) |
| CI01000304_07203008_07211715 | NA | coding | upstream | 232094 | 7202964 ~ 7211715 (-) |
| CI01000304_07212382_07216898 | SKA1 | coding | upstream | 240960 | 7211830 ~ 7216898 (-) |
| G422373 | NA | non-coding | downstream | 220218 | 6686928 ~ 6687167 (-) |
| G422359 | NA | non-coding | downstream | 269937 | 6637226 ~ 6637448 (-) |
| G422357 | NA | non-coding | downstream | 271245 | 6635833 ~ 6636140 (-) |
| G422355 | NA | non-coding | downstream | 273599 | 6631651 ~ 6633786 (-) |
| G422353 | NA | non-coding | downstream | 276510 | 6630578 ~ 6630875 (-) |
| G422429 | NA | non-coding | upstream | 1161 | 6972031 ~ 6972231 (-) |
| G422436 | NA | non-coding | upstream | 11218 | 6982088 ~ 6983628 (-) |
| G422437 | NA | non-coding | upstream | 12825 | 6983695 ~ 6983943 (-) |
| G422439 | NA | non-coding | upstream | 15999 | 6986869 ~ 7028505 (-) |
| G422466 | NA | non-coding | upstream | 141285 | 7112155 ~ 7112374 (-) |
| G422378 | NA | other | downstream | 124339 | 6744679 ~ 6783046 (-) |
| G422354 | NA | other | downstream | 275886 | 6631086 ~ 6631499 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | downstream | 423890 | 6480743 ~ 6483986 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | downstream | 2234438 | 4661766 ~ 4672947 (-) |
| CI01000304_04263955_04264962 | NA | other | downstream | 2642184 | 4263846 ~ 4265201 (-) |
| G422810 | NA | other | upstream | 659289 | 7630159 ~ 7652703 (-) |
| G423386 | NA | other | upstream | 1891353 | 8862223 ~ 8865296 (-) |
| CI01000304_09566730_09575706 | NA | other | upstream | 2597486 | 9566730 ~ 9575706 (-) |
| CI01000304_09737662_09738777 | NA | other | upstream | 2765876 | 9736746 ~ 9738777 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | upstream | 3182576 | 10160458 ~ 10163762 (-) |
