Gene
RNA
| Item | Value |
|---|---|
| gene id | G421292 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 6959488 ~ 6963143 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU483857 | False | 820 | lncRNA | 0.46 | 11 | 6959488 | 6963143 |
| TU483859 | True | 655 | lncRNA | 0.45 | 5 | 6962088 | 6963101 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_06875225_06878962 | NA | coding | upstream | 80180 | 6873700 ~ 6879308 (+) |
| CI01000304_06864719_06866382 | NA | coding | upstream | 93043 | 6864719 ~ 6866445 (+) |
| CI01000304_06844730_06857162 | ATP8B5B | coding | upstream | 102255 | 6843662 ~ 6857233 (+) |
| CI01000304_06804498_06839363 | UNC13BB, UNC13B | coding | upstream | 119745 | 6803920 ~ 6839743 (+) |
| CI01000304_06772878_06775497 | NA | coding | upstream | 183724 | 6772878 ~ 6775764 (+) |
| CI01000304_06986969_07013827 | NA | coding | downstream | 23685 | 6986828 ~ 7015834 (+) |
| CI01000304_07024195_07048285 | SLC5A1, SGLT1 | coding | downstream | 61052 | 7024195 ~ 7048285 (+) |
| CI01000304_07154005_07160649 | SPPL3 | coding | downstream | 190862 | 7154005 ~ 7161125 (+) |
| CI01000304_07236677_07272874 | KCNN2 | coding | downstream | 273002 | 7236145 ~ 7272960 (+) |
| CI01000304_07288867_07299197 | DRG1, DRG1.L | coding | downstream | 325724 | 7288867 ~ 7299754 (+) |
| G421260 | NA | non-coding | upstream | 34453 | 6913997 ~ 6925035 (+) |
| G421280 | NA | non-coding | upstream | 57193 | 6897910 ~ 6902295 (+) |
| G421232 | NA | non-coding | upstream | 177688 | 6772124 ~ 6781800 (+) |
| G421108 | NA | non-coding | upstream | 233431 | 6713612 ~ 6726057 (+) |
| G421133 | NA | non-coding | upstream | 273464 | 6684453 ~ 6686024 (+) |
| G421297 | NA | non-coding | downstream | 8875 | 6972018 ~ 6972221 (+) |
| G421300 | NA | non-coding | downstream | 20406 | 6983549 ~ 6983816 (+) |
| G421310 | NA | non-coding | downstream | 117282 | 7080425 ~ 7097508 (+) |
| G421358 | NA | non-coding | downstream | 156667 | 7119810 ~ 7120041 (+) |
| G421362 | NA | non-coding | downstream | 163450 | 7126593 ~ 7126872 (+) |
| G421162 | NA | other | upstream | 716491 | 6241233 ~ 6242997 (+) |
| CI01000304_05173869_05175309 | NRARP, NRARP.L, NRARPA, NRARPB | other | upstream | 1782697 | 5173426 ~ 5176791 (+) |
| G420445 | NA | other | upstream | 2655656 | 4303336 ~ 4303832 (+) |
| G418981 | NA | other | upstream | 4865810 | 2092494 ~ 2093678 (+) |
| G418116 | NA | other | upstream | 6084239 | 872670 ~ 875249 (+) |
| CI01000304_07352697_07354032 | NA | other | downstream | 389506 | 7352621 ~ 7354396 (+) |
| G421435 | NA | other | downstream | 520998 | 7484141 ~ 7484688 (+) |
| CI01000304_07979388_07979919 | TMEM230, TMEM230A | other | downstream | 1015485 | 7979078 ~ 7980735 (+) |
| CI01000304_08232073_08235598 | NA | other | downstream | 1268851 | 8231293 ~ 8235655 (+) |
| CI01000304_08671901_08672203 | NA | other | downstream | 1708627 | 8671770 ~ 8672555 (+) |
