G421300


Basic Information

Item Value
gene id G421300
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6983549 ~ 6983816 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483868
GGCCGTTTAGGGCTTCCGTAGTTTTTAGTGTGAGTGTATAAAAGTAAACTTCGCAGTATCGAATAATGTCTTACTTAATATCTGTAAATTACAGACTATTTTAAGTTGTTTCTGCTGGTATAAGGAAACAGTTGAAGTGATCACGCCGGCGCCTCGCGTGCACACACAACATATTCCAGCATTGCAAACTTGACATCGTAGCCTGTTCATTATCAAAATAAAATACAGTCAACCAAACATATAAAAAGTTACACTGCTCATTTTAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483868 True 268 lncRNA 0.37 1 6983549 6983816

Neighbor

gene id symbol gene type direction distance location
CI01000304_06875225_06878962 NA coding upstream 104241 6873700 ~ 6879308 (+)
CI01000304_06864719_06866382 NA coding upstream 117104 6864719 ~ 6866445 (+)
CI01000304_06844730_06857162 ATP8B5B coding upstream 126316 6843662 ~ 6857233 (+)
CI01000304_06804498_06839363 UNC13BB, UNC13B coding upstream 143806 6803920 ~ 6839743 (+)
CI01000304_06772878_06775497 NA coding upstream 207785 6772878 ~ 6775764 (+)
CI01000304_06986969_07013827 NA coding downstream 3012 6986828 ~ 7015834 (+)
CI01000304_07024195_07048285 SLC5A1, SGLT1 coding downstream 40379 7024195 ~ 7048285 (+)
CI01000304_07154005_07160649 SPPL3 coding downstream 170189 7154005 ~ 7161125 (+)
CI01000304_07236677_07272874 KCNN2 coding downstream 252329 7236145 ~ 7272960 (+)
CI01000304_07288867_07299197 DRG1, DRG1.L coding downstream 305051 7288867 ~ 7299754 (+)
G421297 NA non-coding upstream 11328 6972018 ~ 6972221 (+)
G421292 NA non-coding upstream 20406 6959488 ~ 6963143 (+)
G421260 NA non-coding upstream 58514 6913997 ~ 6925035 (+)
G421280 NA non-coding upstream 81254 6897910 ~ 6902295 (+)
G421232 NA non-coding upstream 201749 6772124 ~ 6781800 (+)
G421310 NA non-coding downstream 96609 7080425 ~ 7097508 (+)
G421358 NA non-coding downstream 135994 7119810 ~ 7120041 (+)
G421362 NA non-coding downstream 142777 7126593 ~ 7126872 (+)
G421365 NA non-coding downstream 144677 7128493 ~ 7128732 (+)
G421311 NA non-coding downstream 191665 7175481 ~ 7177256 (+)
G421162 NA other upstream 740552 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1806758 5173426 ~ 5176791 (+)
G420445 NA other upstream 2679717 4303336 ~ 4303832 (+)
G418981 NA other upstream 4889871 2092494 ~ 2093678 (+)
G418116 NA other upstream 6108300 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 368833 7352621 ~ 7354396 (+)
G421435 NA other downstream 500325 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 994812 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1248178 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1687954 8671770 ~ 8672555 (+)

Expression


Co-expression Network