G422437


Basic Information

Item Value
gene id G422437
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6983695 ~ 6983943 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU485183
TAGGATTTGTACTTCACTCCCGTTTCAATATCGACGAAAAAAAATCATCCTCTTCACATGAGCAAAAATGTGCTTTGCAGTTTCAGCGGTGGTCACGCTGAACAGCACAGATAGGATACTACGGAGTATTTAAAATGAGCAGTGTAACTTTTTATATGTTTGGTTGACTGTATTTTATTTTGATAATGAACAGGCTACGATGTCAAGTTTGCAATGCTGGAATATGTTGTGTGTGCACGCGAGGCGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485183 True 249 lncRNA 0.40 1 6983695 6983943

Neighbor

gene id symbol gene type direction distance location
CI01000304_06935639_06967113 DEPDC5 coding downstream 14641 6935528 ~ 6969054 (-)
CI01000304_06931421_06933921 YWHAG.S, 143G2, 143G1, YWHAH, YWHAG.L, YWHAG2, YWHAG, YWHAG1 coding downstream 49636 6930738 ~ 6934059 (-)
CI01000304_06914589_06924928 SLC5A1, SGLT1 coding downstream 58543 6913830 ~ 6925152 (-)
CI01000304_06881372_06883185 RNF208 coding downstream 100510 6881054 ~ 6883185 (-)
CI01000304_06867535_06870134 NA coding downstream 113561 6867117 ~ 6870134 (-)
CI01000304_07051182_07056250 NA coding upstream 67185 7051128 ~ 7056250 (-)
CI01000304_07065444_07081535 GNAZ coding upstream 81276 7065219 ~ 7081970 (-)
CI01000304_07183432_07198305 NT5C2L1 coding upstream 198679 7182622 ~ 7198305 (-)
CI01000304_07203008_07211715 NA coding upstream 219021 7202964 ~ 7211715 (-)
CI01000304_07212382_07216898 SKA1 coding upstream 227887 7211830 ~ 7216898 (-)
G422436 NA non-coding downstream 67 6982088 ~ 6983628 (-)
G422429 NA non-coding downstream 11464 6972031 ~ 6972231 (-)
G422420 NA non-coding downstream 12825 6907385 ~ 6970870 (-)
G422373 NA non-coding downstream 296528 6686928 ~ 6687167 (-)
G422359 NA non-coding downstream 346247 6637226 ~ 6637448 (-)
G422439 NA non-coding upstream 2926 6986869 ~ 7028505 (-)
G422466 NA non-coding upstream 128212 7112155 ~ 7112374 (-)
G422468 NA non-coding upstream 135788 7119731 ~ 7120017 (-)
G422469 NA non-coding upstream 138308 7122251 ~ 7122511 (-)
G422473 NA non-coding upstream 143469 7127412 ~ 7128023 (-)
G422378 NA other downstream 200649 6744679 ~ 6783046 (-)
G422354 NA other downstream 352196 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 500200 6480743 ~ 6483986 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 2310748 4661766 ~ 4672947 (-)
CI01000304_04263955_04264962 NA other downstream 2718494 4263846 ~ 4265201 (-)
G422810 NA other upstream 646216 7630159 ~ 7652703 (-)
G423386 NA other upstream 1878280 8862223 ~ 8865296 (-)
CI01000304_09566730_09575706 NA other upstream 2584413 9566730 ~ 9575706 (-)
CI01000304_09737662_09738777 NA other upstream 2752803 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 3169503 10160458 ~ 10163762 (-)

Expression


Co-expression Network