G422468


Basic Information

Item Value
gene id G422468
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7119731 ~ 7120017 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU485233
CGTCTTTTGGACAACTGTCAAGTCAGCAGTCTTCCCCATGATTGTGTAGCCTACAGAACTAGACTGAGAAACCATTTAAAGGCCTTTGCAGGTGTTTTGAGTTAATTAGCTGATTAGAGTGTGGCACCAGGTGTCTTCAATATTGAACCTTTTCACAATATTCTAATTTTCTGAGATACTGAATTTGGGATTTTCCTTAGTTGTCAGTTATAATCATCAAAATTAAAAGAAATAAACATTTCAAATATATCAGTCTGTGTGTAATGAATAAATATAATATACAAGTT

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485233 True 287 lncRNA 0.33 1 7119731 7120017

Neighbor

gene id symbol gene type direction distance location
CI01000304_07065444_07081535 GNAZ coding downstream 37761 7065219 ~ 7081970 (-)
CI01000304_07051182_07056250 NA coding downstream 63481 7051128 ~ 7056250 (-)
CI01000304_06935639_06967113 DEPDC5 coding downstream 150677 6935528 ~ 6969054 (-)
CI01000304_06931421_06933921 YWHAG.S, 143G2, 143G1, YWHAH, YWHAG.L, YWHAG2, YWHAG, YWHAG1 coding downstream 185672 6930738 ~ 6934059 (-)
CI01000304_06914589_06924928 SLC5A1, SGLT1 coding downstream 194579 6913830 ~ 6925152 (-)
CI01000304_07183432_07198305 NT5C2L1 coding upstream 62605 7182622 ~ 7198305 (-)
CI01000304_07203008_07211715 NA coding upstream 82947 7202964 ~ 7211715 (-)
CI01000304_07212382_07216898 SKA1 coding upstream 91813 7211830 ~ 7216898 (-)
CI01000304_07218265_07232779 SMARCAD1B coding upstream 98203 7218220 ~ 7232779 (-)
CI01000304_07282197_07285838 NA coding upstream 161464 7281481 ~ 7285838 (-)
G422466 NA non-coding downstream 7357 7112155 ~ 7112374 (-)
G422439 NA non-coding downstream 91226 6986869 ~ 7028505 (-)
G422437 NA non-coding downstream 135788 6983695 ~ 6983943 (-)
G422436 NA non-coding downstream 136103 6982088 ~ 6983628 (-)
G422429 NA non-coding downstream 147500 6972031 ~ 6972231 (-)
G422469 NA non-coding upstream 2234 7122251 ~ 7122511 (-)
G422473 NA non-coding upstream 7395 7127412 ~ 7128023 (-)
G422512 NA non-coding upstream 156982 7276999 ~ 7277246 (-)
G422442 NA non-coding upstream 202006 7322023 ~ 7325559 (-)
G422521 NA non-coding upstream 218871 7338888 ~ 7340699 (-)
G422378 NA other downstream 336685 6744679 ~ 6783046 (-)
G422354 NA other downstream 488232 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 636236 6480743 ~ 6483986 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 2446784 4661766 ~ 4672947 (-)
CI01000304_04263955_04264962 NA other downstream 2854530 4263846 ~ 4265201 (-)
G422810 NA other upstream 510142 7630159 ~ 7652703 (-)
G423386 NA other upstream 1742206 8862223 ~ 8865296 (-)
CI01000304_09566730_09575706 NA other upstream 2448339 9566730 ~ 9575706 (-)
CI01000304_09737662_09738777 NA other upstream 2616729 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 3033429 10160458 ~ 10163762 (-)

Expression


Co-expression Network