G421358


Basic Information

Item Value
gene id G421358
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7119810 ~ 7120041 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483928
ACTGACAACTAAGGAAAATCCCAAATTCAGTATCTCAGAAAATTAGAATATTGTGAAAAGGTTCAATATTGAAGACACCTGGTGCCACACTCTAATCAGCTAATTAACTCAAAACACCTGCAAAGGCCTTTAAATGGTTTCTCAGTCTAGTTCTGTAGGCTACACAATCATGGGGAAGACTGCTGACTTGACAGTTGTCCAAAAGACGACCATTGACACCTTGCACAAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483928 True 232 lncRNA 0.40 1 7119810 7120041

Neighbor

gene id symbol gene type direction distance location
CI01000304_07024195_07048285 SLC5A1, SGLT1 coding upstream 71525 7024195 ~ 7048285 (+)
CI01000304_06986969_07013827 NA coding upstream 103976 6986828 ~ 7015834 (+)
CI01000304_06875225_06878962 NA coding upstream 240502 6873700 ~ 6879308 (+)
CI01000304_06864719_06866382 NA coding upstream 253365 6864719 ~ 6866445 (+)
CI01000304_06844730_06857162 ATP8B5B coding upstream 262577 6843662 ~ 6857233 (+)
CI01000304_07154005_07160649 SPPL3 coding downstream 33964 7154005 ~ 7161125 (+)
CI01000304_07236677_07272874 KCNN2 coding downstream 116104 7236145 ~ 7272960 (+)
CI01000304_07288867_07299197 DRG1, DRG1.L coding downstream 168826 7288867 ~ 7299754 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding downstream 193656 7313697 ~ 7324618 (+)
CI01000304_07334198_07342123 PIGO coding downstream 214021 7334062 ~ 7342298 (+)
G421310 NA non-coding upstream 22302 7080425 ~ 7097508 (+)
G421300 NA non-coding upstream 135994 6983549 ~ 6983816 (+)
G421297 NA non-coding upstream 147589 6972018 ~ 6972221 (+)
G421292 NA non-coding upstream 156667 6959488 ~ 6963143 (+)
G421260 NA non-coding upstream 194775 6913997 ~ 6925035 (+)
G421362 NA non-coding downstream 6552 7126593 ~ 7126872 (+)
G421365 NA non-coding downstream 8452 7128493 ~ 7128732 (+)
G421311 NA non-coding downstream 55440 7175481 ~ 7177256 (+)
G421305 NA non-coding downstream 62603 7182644 ~ 7186187 (+)
G421369 NA non-coding downstream 82919 7202960 ~ 7203215 (+)
G421162 NA other upstream 876813 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1943019 5173426 ~ 5176791 (+)
G420445 NA other upstream 2815978 4303336 ~ 4303832 (+)
G418981 NA other upstream 5026132 2092494 ~ 2093678 (+)
G418116 NA other upstream 6244561 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 232608 7352621 ~ 7354396 (+)
G421435 NA other downstream 364100 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 858587 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1111953 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1551729 8671770 ~ 8672555 (+)

Expression


Co-expression Network