G422473


Basic Information

Item Value
gene id G422473
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7127412 ~ 7128023 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU485238
CAAGATAAACTTATTTGGTTCAGATGGTGTCAAGCGTGTGTGGCGGCAACCAGGTGAGGAGTACAAAGACAAGTGTGTCTTGCCTACAGTCAAGCATGGTGGTGGGAGTGTCGTGGTCTGGGGCTGCATGAGTGCTGCCGGCACTGGGGAGCTACAGTTCATTGAGGGAACCATGAATGTCAACATGTACTGTGACATACTGAAGCAGAGCATGATCCCCTCCCTTCAGAGACTGGGCCGCAGGGCAGTATTCCAACATGATAACGACCCCAAACACACCTCCAAGACAACCACTGCCTTGCTAAAGAATGTCTCCAGACCTAAACCCTATTGAGCATCTGTGGGGCATCCTCAAATGGAAGGTGGAGGAGCGCAAGGTCTCTAACATCCACCAGCTCCGTGATGTCGTCATGGAGGAGTGGAAGAGGACTGCAGTGGCAACCTGTGAACTCCATGCCTAAGAGGGTTAAGGCAGTGCTGGAAAATAATGGTGGCCACACAAAATATTGACACTTTAGGCCCAATTTGGACATTTTCACTTAGGGGTGTACTCACTTTTGTGGCCAGCGGTTTAGACATTAATGGCTGTGTGTTGAGTTATGTTGAGGGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485238 True 612 lncRNA 0.50 1 7127412 7128023

Neighbor

gene id symbol gene type direction distance location
CI01000304_07065444_07081535 GNAZ coding downstream 45442 7065219 ~ 7081970 (-)
CI01000304_07051182_07056250 NA coding downstream 71162 7051128 ~ 7056250 (-)
CI01000304_06935639_06967113 DEPDC5 coding downstream 158358 6935528 ~ 6969054 (-)
CI01000304_06931421_06933921 YWHAG.S, 143G2, 143G1, YWHAH, YWHAG.L, YWHAG2, YWHAG, YWHAG1 coding downstream 193353 6930738 ~ 6934059 (-)
CI01000304_06914589_06924928 SLC5A1, SGLT1 coding downstream 202260 6913830 ~ 6925152 (-)
CI01000304_07183432_07198305 NT5C2L1 coding upstream 54599 7182622 ~ 7198305 (-)
CI01000304_07203008_07211715 NA coding upstream 74941 7202964 ~ 7211715 (-)
CI01000304_07212382_07216898 SKA1 coding upstream 83807 7211830 ~ 7216898 (-)
CI01000304_07218265_07232779 SMARCAD1B coding upstream 90197 7218220 ~ 7232779 (-)
CI01000304_07282197_07285838 NA coding upstream 153458 7281481 ~ 7285838 (-)
G422469 NA non-coding downstream 4901 7122251 ~ 7122511 (-)
G422468 NA non-coding downstream 7395 7119731 ~ 7120017 (-)
G422466 NA non-coding downstream 15038 7112155 ~ 7112374 (-)
G422439 NA non-coding downstream 98907 6986869 ~ 7028505 (-)
G422437 NA non-coding downstream 143469 6983695 ~ 6983943 (-)
G422512 NA non-coding upstream 148976 7276999 ~ 7277246 (-)
G422442 NA non-coding upstream 194000 7322023 ~ 7325559 (-)
G422521 NA non-coding upstream 210865 7338888 ~ 7340699 (-)
G422528 NA non-coding upstream 224641 7352664 ~ 7354386 (-)
G422536 NA non-coding upstream 239865 7367888 ~ 7368822 (-)
G422378 NA other downstream 344366 6744679 ~ 6783046 (-)
G422354 NA other downstream 495913 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 643917 6480743 ~ 6483986 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 2454465 4661766 ~ 4672947 (-)
CI01000304_04263955_04264962 NA other downstream 2862211 4263846 ~ 4265201 (-)
G422810 NA other upstream 502136 7630159 ~ 7652703 (-)
G423386 NA other upstream 1734200 8862223 ~ 8865296 (-)
CI01000304_09566730_09575706 NA other upstream 2440333 9566730 ~ 9575706 (-)
CI01000304_09737662_09738777 NA other upstream 2608723 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 3025423 10160458 ~ 10163762 (-)

Expression


Co-expression Network