Gene
RNA
| Item | Value |
|---|---|
| gene id | G422442 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 7322023 ~ 7325559 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU485196 | False | 2783 | lncRNA | 0.42 | 2 | 7322023 | 7325559 |
| TU485201 | True | 3031 | lncRNA | 0.43 | 2 | 7322401 | 7325559 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_07303509_07309222 | STARD7 | coding | downstream | 10312 | 7302824 ~ 7311711 (-) |
| CI01000304_07282197_07285838 | NA | coding | downstream | 36185 | 7281481 ~ 7285838 (-) |
| CI01000304_07218265_07232779 | SMARCAD1B | coding | downstream | 89244 | 7218220 ~ 7232779 (-) |
| CI01000304_07212382_07216898 | SKA1 | coding | downstream | 105125 | 7211830 ~ 7216898 (-) |
| CI01000304_07203008_07211715 | NA | coding | downstream | 110308 | 7202964 ~ 7211715 (-) |
| CI01000304_07325899_07328203 | NA | coding | upstream | 89 | 7325648 ~ 7328203 (-) |
| CI01000304_07464639_07466430 | NA | coding | upstream | 138676 | 7464235 ~ 7466430 (-) |
| CI01000304_07612069_07709665 | NA | coding | upstream | 286510 | 7612069 ~ 7709665 (-) |
| CI01000304_07961608_07968820 | NA | coding | upstream | 636006 | 7961565 ~ 7968949 (-) |
| CI01000304_08165245_08217042 | NA | coding | upstream | 839638 | 8165197 ~ 8217042 (-) |
| G422512 | NA | non-coding | downstream | 44777 | 7276999 ~ 7277246 (-) |
| G422473 | NA | non-coding | downstream | 194000 | 7127412 ~ 7128023 (-) |
| G422469 | NA | non-coding | downstream | 199512 | 7122251 ~ 7122511 (-) |
| G422468 | NA | non-coding | downstream | 202006 | 7119731 ~ 7120017 (-) |
| G422466 | NA | non-coding | downstream | 209649 | 7112155 ~ 7112374 (-) |
| G422521 | NA | non-coding | upstream | 13329 | 7338888 ~ 7340699 (-) |
| G422528 | NA | non-coding | upstream | 27105 | 7352664 ~ 7354386 (-) |
| G422536 | NA | non-coding | upstream | 42329 | 7367888 ~ 7368822 (-) |
| G422564 | NA | non-coding | upstream | 85797 | 7411356 ~ 7440582 (-) |
| G422563 | NA | non-coding | upstream | 108797 | 7434356 ~ 7436800 (-) |
| G422378 | NA | other | downstream | 538977 | 6744679 ~ 6783046 (-) |
| G422354 | NA | other | downstream | 690524 | 6631086 ~ 6631499 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | downstream | 838528 | 6480743 ~ 6483986 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | downstream | 2649076 | 4661766 ~ 4672947 (-) |
| CI01000304_04263955_04264962 | NA | other | downstream | 3056822 | 4263846 ~ 4265201 (-) |
| G422810 | NA | other | upstream | 304600 | 7630159 ~ 7652703 (-) |
| G423386 | NA | other | upstream | 1536664 | 8862223 ~ 8865296 (-) |
| CI01000304_09566730_09575706 | NA | other | upstream | 2242797 | 9566730 ~ 9575706 (-) |
| CI01000304_09737662_09738777 | NA | other | upstream | 2411187 | 9736746 ~ 9738777 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | upstream | 2827887 | 10160458 ~ 10163762 (-) |
