G421434


Basic Information

Item Value
gene id G421434
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7483475 ~ 7483688 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU484020
GGCAAAATGTATTTATATAGAATACAAACCCGATTCCAAAAAAGTTGGGACACTGTACAAATTGTGAATAAAAAAGGAATGCAATAATTTACAAATCTCATAAACTTATATTTTATCCACAATAGAATATAGATAACATATCAAATGTTGAAAGTGAGACATTTTGAAATGTCATGCCAAATATTGGCTCATTTTGGATTTCATGAGAGCTNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU484020 True 214 lncRNA 0.28 1 7483475 7483688

Neighbor

gene id symbol gene type direction distance location
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 40783 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 57448 7407720 ~ 7426027 (+)
CI01000304_07352697_07354032 NA coding upstream 129079 7352621 ~ 7354396 (+)
CI01000304_07334198_07342123 PIGO coding upstream 141177 7334062 ~ 7342298 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding upstream 158857 7313697 ~ 7324618 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding downstream 406659 7890347 ~ 7902758 (+)
CI01000304_07909498_07914625 BNIP3LB coding downstream 425810 7909498 ~ 7915942 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 444102 7927790 ~ 7958462 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 495390 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 505214 7988902 ~ 8015304 (+)
G421386 NA non-coding upstream 17705 7283206 ~ 7465770 (+)
G421399 NA non-coding upstream 114661 7367663 ~ 7368814 (+)
G421387 NA non-coding upstream 200345 7280897 ~ 7283130 (+)
G421384 NA non-coding upstream 205587 7277630 ~ 7277888 (+)
G421383 NA non-coding upstream 206213 7276934 ~ 7277262 (+)
G421436 NA non-coding downstream 1065 7484753 ~ 7484961 (+)
G421440 NA non-coding downstream 7400 7491088 ~ 7491301 (+)
G421443 NA non-coding downstream 12342 7496030 ~ 7496396 (+)
G421446 NA non-coding downstream 15795 7499483 ~ 7500085 (+)
G421447 NA non-coding downstream 17375 7501063 ~ 7501334 (+)
G421162 NA other upstream 1240478 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2306684 5173426 ~ 5176791 (+)
G420445 NA other upstream 3179643 4303336 ~ 4303832 (+)
G418981 NA other upstream 5389797 2092494 ~ 2093678 (+)
G421435 NA other downstream 453 7484141 ~ 7484688 (+)
CI01000304_08232073_08235598 NA other downstream 748306 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1188082 8671770 ~ 8672555 (+)
G423614 NA other downstream 1465348 8949036 ~ 8949422 (+)

Expression


Co-expression Network