G421435


Basic Information

Item Value
gene id G421435
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7484141 ~ 7484688 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU484021
CTGCATCACATACAGGAATGCTACTGTAATGGAAATCACAACATGGGCTCAGGAATACTTCCAGAAAACATTGTCGGTGAACACAATCCACCGTGCCATTCGCCGTTGCCGGCTAAAACTCTATAGGTGAAAAAAGAAGCCATATCTTAACATGATCCAGAAGCGCAGGCGTTTTCTCTGGGCCAAGGCTCATTTAAAATTGATTGTGGCAAAGTGGAAAACTGTTCTGTGGTCAGATGAATCAAAATTTGAAGTTCTTTTTGGAAAACTGGGACGCCATGTCATCCGGACTAAAGAGGACAAGGACAACCCAAGTTGTTATCAGCGCTCAGTTCAGAAGCCTGCATCTCTGATGGTATGGGGTTGCATGAGTGCGTGTGGCATGGGCAGCTTACACATCTGGAAAGGCACCATCAATGCTAAAAGGTATATCCAAGTTCTAGAACAACATATGCTCCCATCCAGACGTCGTCTCTTTCAGGGAAGATCTTGCATTTTCCAACATGACAATGCCAGACCACATACTGCATCAATTACAACATCATGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU484021 True 548 TUCP 0.45 1 7484141 7484688

Neighbor

gene id symbol gene type direction distance location
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 41449 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 58114 7407720 ~ 7426027 (+)
CI01000304_07352697_07354032 NA coding upstream 129745 7352621 ~ 7354396 (+)
CI01000304_07334198_07342123 PIGO coding upstream 141843 7334062 ~ 7342298 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding upstream 159523 7313697 ~ 7324618 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding downstream 405659 7890347 ~ 7902758 (+)
CI01000304_07909498_07914625 BNIP3LB coding downstream 424810 7909498 ~ 7915942 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 443102 7927790 ~ 7958462 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 494390 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 504214 7988902 ~ 8015304 (+)
G421434 NA non-coding upstream 453 7483475 ~ 7483688 (+)
G421386 NA non-coding upstream 18371 7283206 ~ 7465770 (+)
G421399 NA non-coding upstream 115327 7367663 ~ 7368814 (+)
G421387 NA non-coding upstream 201011 7280897 ~ 7283130 (+)
G421384 NA non-coding upstream 206253 7277630 ~ 7277888 (+)
G421436 NA non-coding downstream 65 7484753 ~ 7484961 (+)
G421440 NA non-coding downstream 6400 7491088 ~ 7491301 (+)
G421443 NA non-coding downstream 11342 7496030 ~ 7496396 (+)
G421446 NA non-coding downstream 14795 7499483 ~ 7500085 (+)
G421447 NA non-coding downstream 16375 7501063 ~ 7501334 (+)
G421162 NA other upstream 1241144 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2307350 5173426 ~ 5176791 (+)
G420445 NA other upstream 3180309 4303336 ~ 4303832 (+)
G418981 NA other upstream 5390463 2092494 ~ 2093678 (+)
CI01000304_08232073_08235598 NA other downstream 747306 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1187082 8671770 ~ 8672555 (+)
G423614 NA other downstream 1464348 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 2079917 9561005 ~ 9565778 (+)

Expression


Co-expression Network