G421440


Basic Information

Item Value
gene id G421440
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7491088 ~ 7491301 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU484027
CTGACAGAATTCTCTTCTAGTGAGCTTGTGACTCATATGTTCTCTCTTCTCTGTTTATATTCCCCCTTCCATATGTCCCCTAGCATAGCATCCTCCATAAGGAAAAGCACAGGAGGTGATTCCTTGAGGGAAATCATTGCTTATTCTTTTTGAAATGGTAGGGCTCATTGTGTATTTGCTCCCGCGGGAGCAGAAGGTGCGGAATATAATTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU484027 True 214 lncRNA 0.43 1 7491088 7491301

Neighbor

gene id symbol gene type direction distance location
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 48396 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 65061 7407720 ~ 7426027 (+)
CI01000304_07352697_07354032 NA coding upstream 136692 7352621 ~ 7354396 (+)
CI01000304_07334198_07342123 PIGO coding upstream 148790 7334062 ~ 7342298 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding upstream 166470 7313697 ~ 7324618 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding downstream 399046 7890347 ~ 7902758 (+)
CI01000304_07909498_07914625 BNIP3LB coding downstream 418197 7909498 ~ 7915942 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 436489 7927790 ~ 7958462 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 487777 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 497601 7988902 ~ 8015304 (+)
G421436 NA non-coding upstream 6127 7484753 ~ 7484961 (+)
G421434 NA non-coding upstream 7400 7483475 ~ 7483688 (+)
G421386 NA non-coding upstream 25318 7283206 ~ 7465770 (+)
G421399 NA non-coding upstream 122274 7367663 ~ 7368814 (+)
G421387 NA non-coding upstream 207958 7280897 ~ 7283130 (+)
G421443 NA non-coding downstream 4729 7496030 ~ 7496396 (+)
G421446 NA non-coding downstream 8182 7499483 ~ 7500085 (+)
G421447 NA non-coding downstream 9762 7501063 ~ 7501334 (+)
G421448 NA non-coding downstream 10060 7501361 ~ 7501615 (+)
G421449 NA non-coding downstream 11421 7502722 ~ 7503033 (+)
G421435 NA other upstream 6400 7484141 ~ 7484688 (+)
G421162 NA other upstream 1248091 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2314297 5173426 ~ 5176791 (+)
G420445 NA other upstream 3187256 4303336 ~ 4303832 (+)
CI01000304_08232073_08235598 NA other downstream 740693 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1180469 8671770 ~ 8672555 (+)
G423614 NA other downstream 1457735 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 2073304 9561005 ~ 9565778 (+)

Expression


Co-expression Network