G421447


Basic Information

Item Value
gene id G421447
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7501063 ~ 7501334 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU484034
GGTGAATTAAGGGTGAGTGAGAACGAGAAGCGCTCTTCTGGTTAAATTTATTACTTTGATCACTCAATGGTTGCCCTCGTTTAGTAGTTCTTGGCGATTGGCTGCACGCTCCAATCCACCGCATTTCATTATAATTCAAAGGGATGATTGGAAGCTGAGCTCTTCCTCTTCAGACTAAATCAATAAACCAAAATAAATAAATAAATGCTCACTTCTCTGCCTCCTCACGGAGCGATATTTATTTCCCGCTTAAGACGCCTCGCAAACATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU484034 True 272 lncRNA 0.42 1 7501063 7501334

Neighbor

gene id symbol gene type direction distance location
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 58371 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 75036 7407720 ~ 7426027 (+)
CI01000304_07352697_07354032 NA coding upstream 146667 7352621 ~ 7354396 (+)
CI01000304_07334198_07342123 PIGO coding upstream 158765 7334062 ~ 7342298 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding upstream 176445 7313697 ~ 7324618 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding downstream 389013 7890347 ~ 7902758 (+)
CI01000304_07909498_07914625 BNIP3LB coding downstream 408164 7909498 ~ 7915942 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 426456 7927790 ~ 7958462 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 477744 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 487568 7988902 ~ 8015304 (+)
G421446 NA non-coding upstream 978 7499483 ~ 7500085 (+)
G421443 NA non-coding upstream 4667 7496030 ~ 7496396 (+)
G421440 NA non-coding upstream 9762 7491088 ~ 7491301 (+)
G421436 NA non-coding upstream 16102 7484753 ~ 7484961 (+)
G421434 NA non-coding upstream 17375 7483475 ~ 7483688 (+)
G421448 NA non-coding downstream 27 7501361 ~ 7501615 (+)
G421449 NA non-coding downstream 1388 7502722 ~ 7503033 (+)
G421450 NA non-coding downstream 2863 7504197 ~ 7504403 (+)
G421451 NA non-coding downstream 3157 7504491 ~ 7504735 (+)
G421452 NA non-coding downstream 3810 7505144 ~ 7505353 (+)
G421435 NA other upstream 16375 7484141 ~ 7484688 (+)
G421162 NA other upstream 1258066 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2324272 5173426 ~ 5176791 (+)
G420445 NA other upstream 3197231 4303336 ~ 4303832 (+)
CI01000304_08232073_08235598 NA other downstream 730660 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1170436 8671770 ~ 8672555 (+)
G423614 NA other downstream 1447702 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 2063271 9561005 ~ 9565778 (+)

Expression


Co-expression Network