G421459


Basic Information

Item Value
gene id G421459
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7514661 ~ 7514941 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU484046
CAGACAATGAAGCTGCGGCTGAAATTGGTCATTTGTTCACACATTTACTAGTTTCTACATGGTAAAGTGCACATAGTGCACTATATAGGGGATAGGGAACGATTCAGACAGTGTAAATATGCTTTCCATTGACGCGAATGAAGTCCGTTTTCACGTTAGTATAAGCGCGAGCACAGTCTGCTATGGCCCAGGGACACGAGAGCACAGAGAGGATCATATCCGCGAGTCGGCTCAGACCACGAAAGGTATCGGACCCATTTAAATTCTGCACAGAATGCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU484046 True 281 lncRNA 0.46 1 7514661 7514941

Neighbor

gene id symbol gene type direction distance location
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 71969 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 88634 7407720 ~ 7426027 (+)
CI01000304_07352697_07354032 NA coding upstream 160265 7352621 ~ 7354396 (+)
CI01000304_07334198_07342123 PIGO coding upstream 172363 7334062 ~ 7342298 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding upstream 190043 7313697 ~ 7324618 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding downstream 375406 7890347 ~ 7902758 (+)
CI01000304_07909498_07914625 BNIP3LB coding downstream 394557 7909498 ~ 7915942 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 412849 7927790 ~ 7958462 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 464137 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 473961 7988902 ~ 8015304 (+)
G421458 NA non-coding upstream 268 7514194 ~ 7514393 (+)
G421457 NA non-coding upstream 1861 7512526 ~ 7512800 (+)
G421456 NA non-coding upstream 3443 7510944 ~ 7511218 (+)
G421455 NA non-coding upstream 5288 7509098 ~ 7509373 (+)
G421454 NA non-coding upstream 6579 7507792 ~ 7508082 (+)
G421460 NA non-coding downstream 64 7515005 ~ 7515544 (+)
G421461 NA non-coding downstream 899 7515840 ~ 7516231 (+)
G421462 NA non-coding downstream 1948 7516889 ~ 7517102 (+)
G421463 NA non-coding downstream 3697 7518638 ~ 7519433 (+)
G421464 NA non-coding downstream 9440 7524381 ~ 7524617 (+)
G421435 NA other upstream 29973 7484141 ~ 7484688 (+)
G421162 NA other upstream 1271664 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2337870 5173426 ~ 5176791 (+)
G420445 NA other upstream 3210829 4303336 ~ 4303832 (+)
CI01000304_08232073_08235598 NA other downstream 717053 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1156829 8671770 ~ 8672555 (+)
G423614 NA other downstream 1434095 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 2049664 9561005 ~ 9565778 (+)

Expression


Co-expression Network