G421463


Basic Information

Item Value
gene id G421463
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7518638 ~ 7519433 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU484050
ATGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAACACTTACTCAAATGAACTGCACCAACAGAGCAATCGCACAAGAGATTGTTTTAATTGAACTAAACCTGCCAAGTCTGAACACATACTCAGACTTGTGAACAGCTTAATATTTTGTACAAATCAGTTAAGTGAATAACTCAATGACTTGCTTGCGCAGAACTGTGGTGTAAAAAATGTCGAAATGTAATTTGTCGAAAAGGTCAGTGAATGAATCTGAATGATTCTTTTCAATCTGATGAAAATGAGGTAGCAACAGATCTTTACTTATGTATTATGATGTACATCTGAGTGCAACACAATGTCTTACCAAAAAAAATAAAAAACTCTGGTTCAATTGGTTGATTGCATTTTGAGATGTGGCGTTGCACTCAAAAGTGAATACGAGCTTGCAGTCGATTGTGGAGTGGTGGGGTCAAAGCGGACTAAATGATTGGAGAAGTCCGGCATACATCATAAGAGAGAAGTTTGTCATTTTCATCTGAAGACCCAGTTTTGACATTTTGAAAAAAAAGAAAAAATTCATTTTAAAATAAAGCCTACTAGGATGAATTGTGCACATATAGTATGCATTTTGAAAACAAGGTGAATGTTCATTTCATGCTGAAATGAAGACACATTCATTTTACATACAGGTTAATTTTACATAATGGATGTATCAAAAAATACATAATTTTATGGATTATACAAGGCATATCTGCTACAGGAAAAGGGATCTAAAATGAGCTTTTCATTTAGTTTGATACACTTCTGTTTTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU484050 True 796 lncRNA 0.34 1 7518638 7519433

Neighbor

gene id symbol gene type direction distance location
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 75946 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 92611 7407720 ~ 7426027 (+)
CI01000304_07352697_07354032 NA coding upstream 164242 7352621 ~ 7354396 (+)
CI01000304_07334198_07342123 PIGO coding upstream 176340 7334062 ~ 7342298 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding upstream 194020 7313697 ~ 7324618 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding downstream 370914 7890347 ~ 7902758 (+)
CI01000304_07909498_07914625 BNIP3LB coding downstream 390065 7909498 ~ 7915942 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 408357 7927790 ~ 7958462 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 459645 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 469469 7988902 ~ 8015304 (+)
G421462 NA non-coding upstream 1536 7516889 ~ 7517102 (+)
G421461 NA non-coding upstream 2407 7515840 ~ 7516231 (+)
G421460 NA non-coding upstream 3094 7515005 ~ 7515544 (+)
G421459 NA non-coding upstream 3697 7514661 ~ 7514941 (+)
G421458 NA non-coding upstream 4245 7514194 ~ 7514393 (+)
G421464 NA non-coding downstream 4948 7524381 ~ 7524617 (+)
G422604 NA non-coding downstream 15881 7535314 ~ 7535701 (+)
G422608 NA non-coding downstream 19484 7538917 ~ 7539308 (+)
G422627 NA non-coding downstream 41979 7561412 ~ 7561685 (+)
G422628 NA non-coding downstream 44121 7563554 ~ 7563809 (+)
G421435 NA other upstream 33950 7484141 ~ 7484688 (+)
G421162 NA other upstream 1275641 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2341847 5173426 ~ 5176791 (+)
G420445 NA other upstream 3214806 4303336 ~ 4303832 (+)
CI01000304_08232073_08235598 NA other downstream 712561 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1152337 8671770 ~ 8672555 (+)
G423614 NA other downstream 1429603 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 2045172 9561005 ~ 9565778 (+)

Expression


Co-expression Network