G421464


Basic Information

Item Value
gene id G421464
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7524381 ~ 7524617 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU484051
ATGACCTCTAGCAGTGGATCTTATCAACTTATCCTCTTTAGTTTATTCATGTGAAGTTTTTTGCAAACGAAAGCAGATGATTACTGGGACTGGAAATACAGCAGCTTCCTGTCACTGGCAAACTCAGACCAGAGTGTTCCCTCCAGAGGCACCTTTTCTAGGCCCTTAGAGAGGCTGTACTGCACTAGACTGCCAATGGGGGAGAGAAGGAGAAAGTTGGAGGACCTAACAACTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU484051 True 237 lncRNA 0.46 1 7524381 7524617

Neighbor

gene id symbol gene type direction distance location
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 81689 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 98354 7407720 ~ 7426027 (+)
CI01000304_07352697_07354032 NA coding upstream 169985 7352621 ~ 7354396 (+)
CI01000304_07334198_07342123 PIGO coding upstream 182083 7334062 ~ 7342298 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding upstream 199763 7313697 ~ 7324618 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding downstream 365730 7890347 ~ 7902758 (+)
CI01000304_07909498_07914625 BNIP3LB coding downstream 384881 7909498 ~ 7915942 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 403173 7927790 ~ 7958462 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 454461 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 464285 7988902 ~ 8015304 (+)
G421463 NA non-coding upstream 4948 7518638 ~ 7519433 (+)
G421462 NA non-coding upstream 7279 7516889 ~ 7517102 (+)
G421461 NA non-coding upstream 8150 7515840 ~ 7516231 (+)
G421460 NA non-coding upstream 8837 7515005 ~ 7515544 (+)
G421459 NA non-coding upstream 9440 7514661 ~ 7514941 (+)
G422604 NA non-coding downstream 10697 7535314 ~ 7535701 (+)
G422608 NA non-coding downstream 14300 7538917 ~ 7539308 (+)
G422627 NA non-coding downstream 36795 7561412 ~ 7561685 (+)
G422628 NA non-coding downstream 38937 7563554 ~ 7563809 (+)
G422629 NA non-coding downstream 40342 7564959 ~ 7565280 (+)
G421435 NA other upstream 39693 7484141 ~ 7484688 (+)
G421162 NA other upstream 1281384 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2347590 5173426 ~ 5176791 (+)
G420445 NA other upstream 3220549 4303336 ~ 4303832 (+)
CI01000304_08232073_08235598 NA other downstream 707377 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1147153 8671770 ~ 8672555 (+)
G423614 NA other downstream 1424419 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 2039988 9561005 ~ 9565778 (+)

Expression


Co-expression Network