G422604


Basic Information

Item Value
gene id G422604
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7535314 ~ 7535701 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU485386
GAGAGCTTCATGGAATGGGTTTCCATGGCCGAGCAGCTGCATCCAAGCCTTACATCACCAAGTGCAATGCAAAGCGTCGGATGCAGTGGTGTAAAGCACACCACCACTGGACTCTAGAGCAGTGGAGACGTGTTCTCTGGAGTGACGAATCACACTTCTCTGTCTGGCAATCTGATGGACGAGTCTGGGTTTGGCAGTTGCCAGGAGAACTTGGCCCCTTAGTTCCAGTGAAAGGAACTCTTAATGCTTCAGCATACCAAGACATTTTGGACAATTTCATGCTCTTAACTTTGTGGGAACAGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485386 True 304 lncRNA 0.49 2 7535314 7535701

Neighbor

gene id symbol gene type direction distance location
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 92622 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 109287 7407720 ~ 7426027 (+)
CI01000304_07352697_07354032 NA coding upstream 180918 7352621 ~ 7354396 (+)
CI01000304_07334198_07342123 PIGO coding upstream 193016 7334062 ~ 7342298 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding upstream 210696 7313697 ~ 7324618 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding downstream 354646 7890347 ~ 7902758 (+)
CI01000304_07909498_07914625 BNIP3LB coding downstream 373797 7909498 ~ 7915942 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 392089 7927790 ~ 7958462 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 443377 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 453201 7988902 ~ 8015304 (+)
G421464 NA non-coding upstream 10697 7524381 ~ 7524617 (+)
G421463 NA non-coding upstream 15881 7518638 ~ 7519433 (+)
G421462 NA non-coding upstream 18212 7516889 ~ 7517102 (+)
G421461 NA non-coding upstream 19083 7515840 ~ 7516231 (+)
G421460 NA non-coding upstream 19770 7515005 ~ 7515544 (+)
G422608 NA non-coding downstream 3216 7538917 ~ 7539308 (+)
G422627 NA non-coding downstream 25711 7561412 ~ 7561685 (+)
G422628 NA non-coding downstream 27853 7563554 ~ 7563809 (+)
G422629 NA non-coding downstream 29258 7564959 ~ 7565280 (+)
G422633 NA non-coding downstream 39299 7575000 ~ 7575215 (+)
G421435 NA other upstream 50626 7484141 ~ 7484688 (+)
G421162 NA other upstream 1292317 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2358523 5173426 ~ 5176791 (+)
G420445 NA other upstream 3231482 4303336 ~ 4303832 (+)
CI01000304_08232073_08235598 NA other downstream 696293 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1136069 8671770 ~ 8672555 (+)
G423614 NA other downstream 1413335 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 2028904 9561005 ~ 9565778 (+)

Expression


Co-expression Network