G422627


Basic Information

Item Value
gene id G422627
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7561412 ~ 7561685 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU485409
ATTCCATGCCTAGAAGACTTGGTGCTGTCATTAAAAATCATGGAGGCCATACAAAGTACTAGATGTAGTAGTTTTTGTTGTGGGGTGTACTCATTTTTGCATCACCCTAATTTGAGTAAAACTGAAAAATGTGTAATCTAGGTTATATTATTAACCTTACTTTCATGTTATAAGTTAAACAGATGTTATATTAAACTTAGTCTTGTCAACATTTTGGAAATTGTTTTTGTGTTCATTGAGATATTGTTTAAAATGTTACTTTTCAAAGGGGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485409 True 274 lncRNA 0.31 1 7561412 7561685

Neighbor

gene id symbol gene type direction distance location
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 118720 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 135385 7407720 ~ 7426027 (+)
CI01000304_07352697_07354032 NA coding upstream 207016 7352621 ~ 7354396 (+)
CI01000304_07334198_07342123 PIGO coding upstream 219114 7334062 ~ 7342298 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding upstream 236794 7313697 ~ 7324618 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding downstream 328662 7890347 ~ 7902758 (+)
CI01000304_07909498_07914625 BNIP3LB coding downstream 347813 7909498 ~ 7915942 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 366105 7927790 ~ 7958462 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 417393 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 427217 7988902 ~ 8015304 (+)
G422608 NA non-coding upstream 22104 7538917 ~ 7539308 (+)
G422604 NA non-coding upstream 25711 7535314 ~ 7535701 (+)
G421464 NA non-coding upstream 36795 7524381 ~ 7524617 (+)
G421463 NA non-coding upstream 41979 7518638 ~ 7519433 (+)
G421462 NA non-coding upstream 44310 7516889 ~ 7517102 (+)
G422628 NA non-coding downstream 1869 7563554 ~ 7563809 (+)
G422629 NA non-coding downstream 3274 7564959 ~ 7565280 (+)
G422633 NA non-coding downstream 13315 7575000 ~ 7575215 (+)
G422634 NA non-coding downstream 16585 7578270 ~ 7579172 (+)
G422637 NA non-coding downstream 26378 7588063 ~ 7588440 (+)
G421435 NA other upstream 76724 7484141 ~ 7484688 (+)
G421162 NA other upstream 1318415 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2384621 5173426 ~ 5176791 (+)
G420445 NA other upstream 3257580 4303336 ~ 4303832 (+)
CI01000304_08232073_08235598 NA other downstream 670309 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1110085 8671770 ~ 8672555 (+)
G423614 NA other downstream 1387351 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 2002920 9561005 ~ 9565778 (+)

Expression


Co-expression Network