G422637


Basic Information

Item Value
gene id G422637
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7588063 ~ 7588440 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU485419
GGGAAAAACTATCACTTTGGCCGGGAGGGGGTCCCAGGAGTTTTCCATCATAGACATCCCGCTCTTGGTCAGAGGAACTTTGAAGGGCCGGCCATTCGATGTTGAGGCAAGTGGCCGCTCGCTCAAAAACCTCAAAGAAGACCAAAAGCAGTGGGAGCATTCATCTAAAGCGTCACAGATGACGGGATGGTATCCTTGTCTTCCGAGCCGTCGAGAAAGCCAGCATTGTCCTCGTCCCCAGCAGCCGGGTGGCTCATCCATAAACGGGGTTTCGACACCACAAAAGAGGCCGCATCGCGGGAGTCCCCCGTGTGCGCACCTGCGTCGCCTTTTTTTCCCAACAGAGTTGGACAGGCATAATCAGAGCGGCATGTTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485419 True 378 lncRNA 0.55 1 7588063 7588440

Neighbor

gene id symbol gene type direction distance location
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 145371 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 162036 7407720 ~ 7426027 (+)
CI01000304_07352697_07354032 NA coding upstream 233667 7352621 ~ 7354396 (+)
CI01000304_07334198_07342123 PIGO coding upstream 245765 7334062 ~ 7342298 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding upstream 263445 7313697 ~ 7324618 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding downstream 301907 7890347 ~ 7902758 (+)
CI01000304_07909498_07914625 BNIP3LB coding downstream 321058 7909498 ~ 7915942 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 339350 7927790 ~ 7958462 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 390638 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 400462 7988902 ~ 8015304 (+)
G422634 NA non-coding upstream 8891 7578270 ~ 7579172 (+)
G422633 NA non-coding upstream 12848 7575000 ~ 7575215 (+)
G422629 NA non-coding upstream 22783 7564959 ~ 7565280 (+)
G422628 NA non-coding upstream 24254 7563554 ~ 7563809 (+)
G422627 NA non-coding upstream 26378 7561412 ~ 7561685 (+)
G422639 NA non-coding downstream 4584 7593024 ~ 7593235 (+)
G422649 NA non-coding downstream 15013 7603453 ~ 7607680 (+)
G422719 NA non-coding downstream 154635 7743075 ~ 7743289 (+)
G422722 NA non-coding downstream 162800 7751240 ~ 7751583 (+)
G422725 NA non-coding downstream 168126 7756566 ~ 7756767 (+)
G421435 NA other upstream 103375 7484141 ~ 7484688 (+)
G421162 NA other upstream 1345066 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2411272 5173426 ~ 5176791 (+)
G420445 NA other upstream 3284231 4303336 ~ 4303832 (+)
CI01000304_08232073_08235598 NA other downstream 643554 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1083330 8671770 ~ 8672555 (+)
G423614 NA other downstream 1360596 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 1976165 9561005 ~ 9565778 (+)

Expression


Co-expression Network