G422732


Basic Information

Item Value
gene id G422732
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7921713 ~ 7924050 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU485519
AGTGTTAATCATGCGTTACTCATTTTACCTAAAAAATATCTTCTGTGGTGTACATTTAGCTGTCATTCTTACACAATTAATAATTTTGTCTTTTTTGTCATTTTTTAAAAATTATTATTTCAATAAAAATTACTTTTTGCTAAGTCAGCCATCACTATGATATAGTGTTTGGGTTTTTCTTGAATCTTTTTGAAAGTACGTAACCACCCAGCAAAGCAAGCAACCACTCAGAACACAGAATTAGCCTGTATTAGAGCTCTGAAGCACATGTCTGGGAATTTGACCTGAGGTCAGCTCTCCTTCGGCTCTACAGTTCACACACCGAGCCTGTTGTTGATACTTCTGTGAGATGATTACTTTGGAGCCAGACCAGCCCAGAGACAGAGTGATGTCTGTGGTCCTTTCATCAACTATTTGTCATGTTACATGCAGCTCTAAGTTATTTTGATCTTACCACATTCCTCCTATTAGTGTAGCTTTTTTTCTCGTTGAGATGTTAGGGTTAACCAGACCCAGCTCCTCCTAAACATGAGTTTGGACCATTCTGGCAACTGCCCGTCCCTTATATCTGACTCACGTTTCTTGTACAAGTTCATGCACTTATCTTAACTGTGAATATGAGATGCCTGCCATATTTTTGCTCTGCCATTTTTTTTTGTCTGAGATAATGTGGACTTTCACAGTTCCTTGCTTAAGTTCCTTATGGATCACCTAGGGTTGAATGAGCACCACAGTGCTGTAGTCGAACAGATATCTGTAGTCGAAATGCTTCATCTGTCCTTGGTTTTACAGCAGTGTGCAGAAAAGCTATTAGCATTGAATCCATTTTATCCATTGATTTTGTGTGAAATGCTGCACAAATTCATTTGCACTATATCCTCGAGGGGTGTTACATGCATTTGCTCACAAGAGGCTGAAACTAATTTACCAACATTAAAGCGCCTAAACTGCCTTTGTGAGTTCACCTGGTTTTAATTTACTTGAAAATGAATCAGTTTAGATGGAGTTAGCAGTCTAAAGCGTTACTAAACTGCCCTCTTGTGGCGCAGATGGGAAAATAAGGGTGTGCCTCATTCTAACCGAGCTGGATATGGATAAATACATCATCTGTATTCCAACATCTTGTGGTATTTGCTTATGGATACAGTTGCCTACAACTACAGATTTTTTTTTTCTTTTCTTTTCACGGTTTGCCCCTGTCAGGAGTCTTAAGATAGCTTTGCAGAAGCCAAATAATTGATGAGTCAGCAATTGCTGCAACCTAGGGCGTTTTCTTCAGCACAACACAAATCAAATCAGAATACAGTCGGTACGTTCCATTCAGTAACATCGACATGCATCGTAATGCATGTGTTGATCTTTTTTATCTTACTGTGCCGTATTCACACTGCAGAAGTATTTGTCACAAGTGGTCGCTTTGTGTGTATTTTAGGCTCTTTTAAATAAGTTATCTTCTTAAAATAACAGGTTAAAAATCTAGTTCCCCTGAGTTGCATATTCCTGTTTGAATTAGTCTAGCCTTGCAGTAGCCCATGGCAACCGCATAGGCTGTAGGAGGAGGAGCTGTAATTGAACTTCCAGTCTTGTGATTGGCTGAAACAGGTGTTCTGAGGTTCCGTAATGAATGATGACTGAAGTATGCATACTTGTGTGCTCCAAAGCAAGACCATTATCTAAGCCACATAATGACTTCTGTTAACCAGAGAAGAGTTTTGGAAAAATCTATTAAGTTTTCTCTTTACGTCATTTTTATGCATGCATGTCTGATGTTTGATTTGGGGGAATTAAATGAAACGAGTTGATCCTTTGTTCCTTTTGTGGCACAAACTGTCTTTCTCACTCTTCCCCCCTCAGTCCAACAGCCTGCAAAGACAGTAGCTAATGCAGCAACTCTTTTGAGCGGGTAAGGACACATGTTGTTGTTATGGAAACTGGGCTTTCAGAGCTATTATTGTGAGGTCTCTTTGGAGAAGCGAACAGAATGTGTCTCCAATGAGCGACTCTCCACCGAAATGTTCCACTGACCAACATACTCACATACTGCAAAGTGAGAAATTTGTGCGCAAAATATATTGGCTTTTTTACTTGAAATCGAACTATTTCTAATATGATAATTAGGCTACTATGTGTTGCTGCTATAGACCTTGGCTTATTCAGAGCAGAGCCATGACAGGTATAAAAAGAGCAAGGCTTGTGAGGATTACGTTTTCAGTGGCATCCGCCATTTTTTTTTAGCTTTATACAGGGTTTTTTTTTCTACTGAAATTTCTTGGAAAGATATTTTTGCAGTGTTTTGTCAGCAGAACAATCCAAAAACACATTAAATAACAGTACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485519 True 2338 lncRNA 0.39 1 7921713 7924050

Neighbor

gene id symbol gene type direction distance location
CI01000304_07909498_07914625 BNIP3LB coding upstream 5771 7909498 ~ 7915942 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding upstream 18955 7890347 ~ 7902758 (+)
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 479021 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 495686 7407720 ~ 7426027 (+)
CI01000304_07352697_07354032 NA coding upstream 567317 7352621 ~ 7354396 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 3740 7927790 ~ 7958462 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 55028 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 64852 7988902 ~ 8015304 (+)
CI01000304_08120416_08124549 LRRTM4L1 coding downstream 196366 8120416 ~ 8124597 (+)
CI01000304_08222591_08229908 NA coding downstream 298541 8222591 ~ 8230947 (+)
G422733 NA non-coding upstream 13595 7758062 ~ 7908118 (+)
G422725 NA non-coding upstream 164946 7756566 ~ 7756767 (+)
G422722 NA non-coding upstream 170130 7751240 ~ 7751583 (+)
G422719 NA non-coding upstream 178424 7743075 ~ 7743289 (+)
G422649 NA non-coding upstream 314033 7603453 ~ 7607680 (+)
G422778 NA non-coding downstream 45207 7969257 ~ 7969479 (+)
G422779 NA non-coding downstream 47087 7971137 ~ 7971363 (+)
G422780 NA non-coding downstream 48478 7972528 ~ 7972733 (+)
G422781 NA non-coding downstream 49742 7973792 ~ 7973992 (+)
G422782 NA non-coding downstream 50787 7974837 ~ 7975048 (+)
G421435 NA other upstream 437025 7484141 ~ 7484688 (+)
G421162 NA other upstream 1678716 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2744922 5173426 ~ 5176791 (+)
G420445 NA other upstream 3617881 4303336 ~ 4303832 (+)
CI01000304_08232073_08235598 NA other downstream 307944 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 747720 8671770 ~ 8672555 (+)
G423614 NA other downstream 1024986 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 1640555 9561005 ~ 9565778 (+)

Expression


Co-expression Network