G422779


Basic Information

Item Value
gene id G422779
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7971137 ~ 7971363 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU485566
CAAGCCTTTAAACAGACAATTGACAAACTTTCTTGAGGATGTAAGCGAAAGTGATCACACTGTATGCGTTGACTCGGCGAGTCGGCGTTTGAGTTCGCCTCTGTGTTGCTTCCATGGCGCTGACTGGACGGGACAGAGTCACATAACTACACACGCGGTACAATGATTTTAACTCTTTCGCACGTAAGTTTAAAATATTCTGGCTGACCCCCCAGCGTGACTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485566 True 227 lncRNA 0.46 1 7971137 7971363

Neighbor

gene id symbol gene type direction distance location
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding upstream 12675 7927790 ~ 7958462 (+)
CI01000304_07909498_07914625 BNIP3LB coding upstream 55195 7909498 ~ 7915942 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding upstream 68379 7890347 ~ 7902758 (+)
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 528445 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 545110 7407720 ~ 7426027 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 7715 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 17539 7988902 ~ 8015304 (+)
CI01000304_08120416_08124549 LRRTM4L1 coding downstream 149053 8120416 ~ 8124597 (+)
CI01000304_08222591_08229908 NA coding downstream 251228 8222591 ~ 8230947 (+)
CI01000304_08232073_08235598 NA coding downstream 259930 8231293 ~ 8235655 (+)
G422778 NA non-coding upstream 1658 7969257 ~ 7969479 (+)
G422732 NA non-coding upstream 47087 7921713 ~ 7924050 (+)
G422733 NA non-coding upstream 63019 7758062 ~ 7908118 (+)
G422725 NA non-coding upstream 214370 7756566 ~ 7756767 (+)
G422722 NA non-coding upstream 219554 7751240 ~ 7751583 (+)
G422780 NA non-coding downstream 1165 7972528 ~ 7972733 (+)
G422781 NA non-coding downstream 2429 7973792 ~ 7973992 (+)
G422782 NA non-coding downstream 3474 7974837 ~ 7975048 (+)
G422783 NA non-coding downstream 3812 7975175 ~ 7975403 (+)
G422795 NA non-coding downstream 55495 8026858 ~ 8027123 (+)
G421435 NA other upstream 486449 7484141 ~ 7484688 (+)
CI01000304_07352697_07354032 NA other upstream 616805 7352621 ~ 7354396 (+)
G421162 NA other upstream 1728140 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2794346 5173426 ~ 5176791 (+)
G420445 NA other upstream 3667305 4303336 ~ 4303832 (+)
CI01000304_08671901_08672203 NA other downstream 700407 8671770 ~ 8672555 (+)
G423614 NA other downstream 977673 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 1593242 9561005 ~ 9565778 (+)

Expression


Co-expression Network