G422782


Basic Information

Item Value
gene id G422782
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7974837 ~ 7975048 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU485569
CTGGGACTATAGGCTTAAGCTTTGTCTGTGAACTGGGTTAAATTAAATTGCTCATTTGTGAGCCCCATTTTGAATAATGGATTGACACACGTTATAAAAAAAATCATTAAACAAATCACAGTAAAAATAAATATTAATTATGAAACTTTCTTTATTGACTCACCCTGAGTTTCCCCTCTTTCAATTATGACCAAGAATAAACCTTTCCTTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485569 True 212 lncRNA 0.32 1 7974837 7975048

Neighbor

gene id symbol gene type direction distance location
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding upstream 16375 7927790 ~ 7958462 (+)
CI01000304_07909498_07914625 BNIP3LB coding upstream 58895 7909498 ~ 7915942 (+)
CI01000304_07890347_07902088 PPP2R2AB, PPP2R2A coding upstream 72079 7890347 ~ 7902758 (+)
CI01000304_07436662_07442126 PRKAB1A, PRKAB1 coding upstream 532145 7436662 ~ 7442692 (+)
CI01000304_07409324_07425656 PHF24 coding upstream 548810 7407720 ~ 7426027 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding downstream 4030 7979078 ~ 7980735 (+)
CI01000304_07989774_08014921 IGSF9A coding downstream 13854 7988902 ~ 8015304 (+)
CI01000304_08120416_08124549 LRRTM4L1 coding downstream 145368 8120416 ~ 8124597 (+)
CI01000304_08222591_08229908 NA coding downstream 247543 8222591 ~ 8230947 (+)
CI01000304_08232073_08235598 NA coding downstream 256245 8231293 ~ 8235655 (+)
G422781 NA non-coding upstream 845 7973792 ~ 7973992 (+)
G422780 NA non-coding upstream 2104 7972528 ~ 7972733 (+)
G422779 NA non-coding upstream 3474 7971137 ~ 7971363 (+)
G422778 NA non-coding upstream 5358 7969257 ~ 7969479 (+)
G422732 NA non-coding upstream 50787 7921713 ~ 7924050 (+)
G422783 NA non-coding downstream 127 7975175 ~ 7975403 (+)
G422795 NA non-coding downstream 51810 8026858 ~ 8027123 (+)
G422803 NA non-coding downstream 64764 8039812 ~ 8040230 (+)
G422966 NA non-coding downstream 89610 8064658 ~ 8065423 (+)
G422972 NA non-coding downstream 94014 8069062 ~ 8069399 (+)
G421435 NA other upstream 490149 7484141 ~ 7484688 (+)
CI01000304_07352697_07354032 NA other upstream 620505 7352621 ~ 7354396 (+)
G421162 NA other upstream 1731840 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 2798046 5173426 ~ 5176791 (+)
G420445 NA other upstream 3671005 4303336 ~ 4303832 (+)
CI01000304_08671901_08672203 NA other downstream 696722 8671770 ~ 8672555 (+)
G423614 NA other downstream 973988 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 1589557 9561005 ~ 9565778 (+)

Expression


Co-expression Network