Gene
RNA
| Item | Value |
|---|---|
| gene id | G422951 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 8029210 ~ 8029483 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| tight junction protein ZO-3-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU485750 | True | 274 | lncRNA | 0.35 | 1 | 8029210 | 8029483 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_07961608_07968820 | NA | coding | downstream | 60261 | 7961565 ~ 7968949 (-) |
| CI01000304_07612069_07709665 | NA | coding | downstream | 319545 | 7612069 ~ 7709665 (-) |
| CI01000304_07464639_07466430 | NA | coding | downstream | 562780 | 7464235 ~ 7466430 (-) |
| CI01000304_07325899_07328203 | NA | coding | downstream | 701007 | 7325648 ~ 7328203 (-) |
| CI01000304_07303509_07309222 | STARD7 | coding | downstream | 717499 | 7302824 ~ 7311711 (-) |
| CI01000304_08165245_08217042 | NA | coding | upstream | 135714 | 8165197 ~ 8217042 (-) |
| CI01000304_08218405_08218927 | NA | coding | upstream | 188151 | 8217634 ~ 8218927 (-) |
| CI01000304_08329095_08386362 | GFRA2B, GFRA2 | coding | upstream | 299612 | 8329095 ~ 8386362 (-) |
| CI01000304_08510508_08532975 | NA | coding | upstream | 480987 | 8510470 ~ 8533026 (-) |
| CI01000304_08567281_08570808 | PBDC1 | coding | upstream | 537711 | 8567194 ~ 8570808 (-) |
| G422946 | NA | non-coding | downstream | 12526 | 8014042 ~ 8016684 (-) |
| G422939 | NA | non-coding | downstream | 24609 | 8002400 ~ 8004601 (-) |
| G422935 | NA | non-coding | downstream | 47269 | 7981730 ~ 7981941 (-) |
| G422933 | NA | non-coding | downstream | 52819 | 7975943 ~ 7976391 (-) |
| G422931 | NA | non-coding | downstream | 58516 | 7970488 ~ 7970694 (-) |
| G422957 | NA | non-coding | upstream | 15040 | 8044523 ~ 8044813 (-) |
| G422959 | NA | non-coding | upstream | 21611 | 8051094 ~ 8051602 (-) |
| G422960 | NA | non-coding | upstream | 24127 | 8053610 ~ 8053832 (-) |
| G422967 | NA | non-coding | upstream | 35175 | 8064658 ~ 8064909 (-) |
| G422988 | NA | non-coding | upstream | 56964 | 8086447 ~ 8086790 (-) |
| G422810 | NA | other | downstream | 376507 | 7630159 ~ 7652703 (-) |
| G422378 | NA | other | downstream | 1246164 | 6744679 ~ 6783046 (-) |
| G422354 | NA | other | downstream | 1397711 | 6631086 ~ 6631499 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | downstream | 1545715 | 6480743 ~ 6483986 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | downstream | 3356263 | 4661766 ~ 4672947 (-) |
| G423386 | NA | other | upstream | 832740 | 8862223 ~ 8865296 (-) |
| CI01000304_09566730_09575706 | NA | other | upstream | 1538873 | 9566730 ~ 9575706 (-) |
| CI01000304_09737662_09738777 | NA | other | upstream | 1707263 | 9736746 ~ 9738777 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | upstream | 2123963 | 10160458 ~ 10163762 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | upstream | 2161091 | 10190574 ~ 10192357 (-) |
