G423337


Basic Information

Item Value
gene id G423337
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8219608 ~ 8220174 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU486182
CCGCTTTTCTCCTCCGTGTTCAATTATGACGTATCCTCTCCCGTGGCCTCCTGGGATAGAAAAGTATCGATCGAGGAACACTTGAGAATCTGGACGGAAGTAGTAGGTCATCCGGGAACTTCTCGACTACTCATTTATGATTACTGAGGTTTCTGACATACTTAATTGCTCGCCTACTGCTTTTTCCCTATTATATAGTAGAGAAGTAGGCGGTTTCGGACGCACTTTAAGTAGACGCACGTCCGCATCTCGCGAGAATTAGTACGTCACCTAGGTACTCTTTTTGCTTCGGACATACTTATTCGCTCGCCTACTGCTTTTCCTCTACTAAATAGTAGAGAAGTAGGCGGTTTCGGACGCAGCCAGTGTCACTCCTGCGTGTTTGTAAGATGTAAGTCACGTGACATACTTTCCTTTTCTTTAACACCGGGCTGAGGAAGTTTTTAGTTCAGATAAGACGTTCTCTGTATCAAACTCCACAAACAAGCAAGCAAGCGAACCACCACTAATCAGCAGCATTAAACAAATGGCACAGCCAACGAACACTCCAAGCTCCCTCCCCTTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486182 True 567 lncRNA 0.46 1 8219608 8220174

Neighbor

gene id symbol gene type direction distance location
CI01000304_08218405_08218927 NA coding downstream 681 8217634 ~ 8218927 (-)
CI01000304_08165245_08217042 NA coding downstream 2566 8165197 ~ 8217042 (-)
CI01000304_07961608_07968820 NA coding downstream 250659 7961565 ~ 7968949 (-)
CI01000304_07612069_07709665 NA coding downstream 509943 7612069 ~ 7709665 (-)
CI01000304_07464639_07466430 NA coding downstream 753178 7464235 ~ 7466430 (-)
CI01000304_08329095_08386362 GFRA2B, GFRA2 coding upstream 108921 8329095 ~ 8386362 (-)
CI01000304_08510508_08532975 NA coding upstream 290296 8510470 ~ 8533026 (-)
CI01000304_08567281_08570808 PBDC1 coding upstream 347020 8567194 ~ 8570808 (-)
CI01000304_08605819_08615439 HTR7B coding upstream 384701 8604875 ~ 8617967 (-)
CI01000304_08680653_08681838 NA coding upstream 459957 8680131 ~ 8682389 (-)
G423368 NA non-coding downstream 27601 8190502 ~ 8192007 (-)
G423367 NA non-coding downstream 61911 8157485 ~ 8157697 (-)
G423356 NA non-coding downstream 71139 8148071 ~ 8148469 (-)
G422988 NA non-coding downstream 132818 8086447 ~ 8086790 (-)
G422967 NA non-coding downstream 154699 8064658 ~ 8064909 (-)
G423369 NA non-coding upstream 11820 8231994 ~ 8235291 (-)
G423375 NA non-coding upstream 16708 8236882 ~ 8237130 (-)
G423379 NA non-coding upstream 21686 8241860 ~ 8242079 (-)
G423448 NA non-coding upstream 84010 8304184 ~ 8304715 (-)
G423454 NA non-coding upstream 97727 8317901 ~ 8322796 (-)
G422810 NA other downstream 566905 7630159 ~ 7652703 (-)
G422378 NA other downstream 1436562 6744679 ~ 6783046 (-)
G422354 NA other downstream 1588109 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 1736113 6480743 ~ 6483986 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 3546661 4661766 ~ 4672947 (-)
G423386 NA other upstream 642049 8862223 ~ 8865296 (-)
CI01000304_09566730_09575706 NA other upstream 1348182 9566730 ~ 9575706 (-)
CI01000304_09737662_09738777 NA other upstream 1516572 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 1933272 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 1970400 10190574 ~ 10192357 (-)

Expression


Co-expression Network