G423085


Basic Information

Item Value
gene id G423085
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8275620 ~ 8279848 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU485900
AGCAGAGCGTGAGAAGAGTGCAGGTGAGTGATGTCAGATGAATGGGTCGATGAGCCGATGAACTGGAAACTGATACTTGTCTGTGTTCTCTAGGGAGCGTGGATACCGGGAGACGAGGAGCAGACGAACACACAGGAGAAGCACAGGAGACGAGGAGACACTGGGAATCACTGAAGACGCTGGAGATAGGTAAGTAGTCGAGTAGGGAGTCCTGGAGGTAAGTAAACACTAGCATGTGTTAACGAGACCGGACAGTGACTGAGTGAACTGGCGTGACTTATATGTGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU485900 True 289 lncRNA 0.51 2 8275620 8279848

Neighbor

gene id symbol gene type direction distance location
CI01000304_08232073_08235598 NA coding upstream 39965 8231293 ~ 8235655 (+)
CI01000304_08222591_08229908 NA coding upstream 44673 8222591 ~ 8230947 (+)
CI01000304_08120416_08124549 LRRTM4L1 coding upstream 151023 8120416 ~ 8124597 (+)
CI01000304_07989774_08014921 IGSF9A coding upstream 260316 7988902 ~ 8015304 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding upstream 294900 7979078 ~ 7980735 (+)
CI01000304_08547909_08562342 XPO7 coding downstream 268061 8547909 ~ 8562604 (+)
CI01000304_08582404_08594691 DMTN coding downstream 302556 8582404 ~ 8594884 (+)
CI01000304_08624038_08653167 PPP3CCA, PPP3CCB, PPP3CC, PP2BC coding downstream 344190 8624038 ~ 8653550 (+)
CI01000304_08671901_08672203 NA coding downstream 391956 8671770 ~ 8672555 (+)
CI01000304_08741397_08752689 NA coding downstream 461549 8741397 ~ 8752689 (+)
G423011 NA non-coding upstream 55437 8219614 ~ 8220183 (+)
G423020 NA non-coding upstream 113929 8160555 ~ 8161691 (+)
G423046 NA non-coding upstream 122384 8152857 ~ 8153236 (+)
G423043 NA non-coding upstream 124450 8150802 ~ 8151170 (+)
G423041 NA non-coding upstream 127180 8148071 ~ 8148440 (+)
G423093 NA non-coding downstream 13039 8292887 ~ 8293121 (+)
G423099 NA non-coding downstream 31024 8310872 ~ 8311078 (+)
G423101 NA non-coding downstream 32566 8312414 ~ 8312712 (+)
G423105 NA non-coding downstream 44889 8324737 ~ 8324963 (+)
G423179 NA non-coding downstream 156901 8436749 ~ 8436957 (+)
G421435 NA other upstream 790932 7484141 ~ 7484688 (+)
CI01000304_07352697_07354032 NA other upstream 921288 7352621 ~ 7354396 (+)
G421162 NA other upstream 2032623 6241233 ~ 6242997 (+)
G423614 NA other downstream 669188 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 1284757 9561005 ~ 9565778 (+)
G424246 NA other downstream 1840551 10116343 ~ 10127322 (+)
G424251 NA other downstream 1908974 10188822 ~ 10189404 (+)

Expression


Co-expression Network