Gene
RNA
| Item | Value |
|---|---|
| gene id | G423474 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 8390536 ~ 8390762 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU486325 | True | 227 | lncRNA | 0.43 | 1 | 8390536 | 8390762 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_08329095_08386362 | GFRA2B, GFRA2 | coding | downstream | 4174 | 8329095 ~ 8386362 (-) |
| CI01000304_08218405_08218927 | NA | coding | downstream | 171609 | 8217634 ~ 8218927 (-) |
| CI01000304_08165245_08217042 | NA | coding | downstream | 173494 | 8165197 ~ 8217042 (-) |
| CI01000304_07961608_07968820 | NA | coding | downstream | 421587 | 7961565 ~ 7968949 (-) |
| CI01000304_07612069_07709665 | NA | coding | downstream | 680871 | 7612069 ~ 7709665 (-) |
| CI01000304_08510508_08532975 | NA | coding | upstream | 119708 | 8510470 ~ 8533026 (-) |
| CI01000304_08567281_08570808 | PBDC1 | coding | upstream | 176432 | 8567194 ~ 8570808 (-) |
| CI01000304_08605819_08615439 | HTR7B | coding | upstream | 214113 | 8604875 ~ 8617967 (-) |
| CI01000304_08680653_08681838 | NA | coding | upstream | 289369 | 8680131 ~ 8682389 (-) |
| CI01000304_08692093_08712203 | NA | coding | upstream | 301197 | 8691959 ~ 8712203 (-) |
| G423472 | NA | non-coding | downstream | 502 | 8389819 ~ 8390034 (-) |
| G423454 | NA | non-coding | downstream | 67740 | 8317901 ~ 8322796 (-) |
| G423448 | NA | non-coding | downstream | 85821 | 8304184 ~ 8304715 (-) |
| G423379 | NA | non-coding | downstream | 148457 | 8241860 ~ 8242079 (-) |
| G423375 | NA | non-coding | downstream | 153406 | 8236882 ~ 8237130 (-) |
| G423496 | NA | non-coding | upstream | 36061 | 8426823 ~ 8427031 (-) |
| G423501 | NA | non-coding | upstream | 44504 | 8435266 ~ 8435602 (-) |
| G423516 | NA | non-coding | upstream | 65684 | 8456446 ~ 8456781 (-) |
| G423521 | NA | non-coding | upstream | 76278 | 8467040 ~ 8467272 (-) |
| G423524 | NA | non-coding | upstream | 82912 | 8473674 ~ 8473876 (-) |
| G422810 | NA | other | downstream | 737833 | 7630159 ~ 7652703 (-) |
| G422378 | NA | other | downstream | 1607490 | 6744679 ~ 6783046 (-) |
| G422354 | NA | other | downstream | 1759037 | 6631086 ~ 6631499 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | downstream | 1907041 | 6480743 ~ 6483986 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | downstream | 3717589 | 4661766 ~ 4672947 (-) |
| G423386 | NA | other | upstream | 471461 | 8862223 ~ 8865296 (-) |
| CI01000304_09566730_09575706 | NA | other | upstream | 1177594 | 9566730 ~ 9575706 (-) |
| CI01000304_09737662_09738777 | NA | other | upstream | 1345984 | 9736746 ~ 9738777 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | upstream | 1762684 | 10160458 ~ 10163762 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | upstream | 1799812 | 10190574 ~ 10192357 (-) |
