G423496



Basic Information


Item Value
gene id G423496
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8426823 ~ 8427031 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU486347
TTCAGCATGATTCCGCCTATCCTGCCTTCTCTAACAGTAAGTTAATCGATAACGTATTGTGATTGGATGGTAATTTTGTTCTATGACAAATTTGATTGGGCTGTTCTCGCTTGACAGAACACTACTACTACTCGTTCCATCAGTCATAATGAAATTTTAGGAAAGATTAAAAATGCGGGACAAAACATGATTTTTTCTTAATAAGTCAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU486347 True 209 lncRNA 0.35 1 8426823 8427031

Neighbor


gene id symbol gene type direction distance location
CI01000304_08329095_08386362 GFRA2B, GFRA2 coding downstream 40461 8329095 ~ 8386362 (-)
CI01000304_08218405_08218927 NA coding downstream 207896 8217634 ~ 8218927 (-)
CI01000304_08165245_08217042 NA coding downstream 209781 8165197 ~ 8217042 (-)
CI01000304_07961608_07968820 NA coding downstream 457874 7961565 ~ 7968949 (-)
CI01000304_07612069_07709665 NA coding downstream 717158 7612069 ~ 7709665 (-)
CI01000304_08510508_08532975 NA coding upstream 83439 8510470 ~ 8533026 (-)
CI01000304_08567281_08570808 PBDC1 coding upstream 140163 8567194 ~ 8570808 (-)
CI01000304_08605819_08615439 HTR7B coding upstream 177844 8604875 ~ 8617967 (-)
CI01000304_08680653_08681838 NA coding upstream 253100 8680131 ~ 8682389 (-)
CI01000304_08692093_08712203 NA coding upstream 264928 8691959 ~ 8712203 (-)
G423474 NA non-coding downstream 36061 8390536 ~ 8390762 (-)
G423472 NA non-coding downstream 36789 8389819 ~ 8390034 (-)
G423454 NA non-coding downstream 104027 8317901 ~ 8322796 (-)
G423448 NA non-coding downstream 122108 8304184 ~ 8304715 (-)
G423379 NA non-coding downstream 184744 8241860 ~ 8242079 (-)
G423501 NA non-coding upstream 8235 8435266 ~ 8435602 (-)
G423516 NA non-coding upstream 29415 8456446 ~ 8456781 (-)
G423521 NA non-coding upstream 40009 8467040 ~ 8467272 (-)
G423524 NA non-coding upstream 46643 8473674 ~ 8473876 (-)
G423529 NA non-coding upstream 51151 8478182 ~ 8478664 (-)
G422810 NA other downstream 774120 7630159 ~ 7652703 (-)
G422378 NA other downstream 1643777 6744679 ~ 6783046 (-)
G422354 NA other downstream 1795324 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 1943328 6480743 ~ 6483986 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 3753876 4661766 ~ 4672947 (-)
G423386 NA other upstream 435192 8862223 ~ 8865296 (-)
CI01000304_09566730_09575706 NA other upstream 1141325 9566730 ~ 9575706 (-)
CI01000304_09737662_09738777 NA other upstream 1309715 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 1726415 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 1763543 10190574 ~ 10192357 (-)

Expression



Co-expression Network