G423516



Basic Information


Item Value
gene id G423516
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8456446 ~ 8456781 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU486367
GGATGGACCCAATATTTCCCAGAGGTGAAAAGTACTTGAGTAAATGTAATTAGTTACTGTACTTAAGTATCTTTTTGGCTACTTTGTAGTTGTACTGAGTATAAAAGATATTGGCAATTTTTACTCTCTACTTGACTACATTTTTGAGCAAGTAAATGTACTTTTTACTCCACTACATTTGTGATGAGTAATGCAGTTACAAATTACATTTTTCATGGCAGCTAACTTTTTCTGCAGCAGTTTGTTTCAGATATAAAGAAGCGATATCACCATCTAAGGGCATTGAAGGTACTATATCTTGTGCATTTTGCCTTTACTCACCCAAAACTTGTCAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU486367 True 336 lncRNA 0.34 1 8456446 8456781

Neighbor


gene id symbol gene type direction distance location
CI01000304_08329095_08386362 GFRA2B, GFRA2 coding downstream 70084 8329095 ~ 8386362 (-)
CI01000304_08218405_08218927 NA coding downstream 237519 8217634 ~ 8218927 (-)
CI01000304_08165245_08217042 NA coding downstream 239404 8165197 ~ 8217042 (-)
CI01000304_07961608_07968820 NA coding downstream 487497 7961565 ~ 7968949 (-)
CI01000304_07612069_07709665 NA coding downstream 746781 7612069 ~ 7709665 (-)
CI01000304_08510508_08532975 NA coding upstream 53689 8510470 ~ 8533026 (-)
CI01000304_08567281_08570808 PBDC1 coding upstream 110413 8567194 ~ 8570808 (-)
CI01000304_08605819_08615439 HTR7B coding upstream 148094 8604875 ~ 8617967 (-)
CI01000304_08680653_08681838 NA coding upstream 223350 8680131 ~ 8682389 (-)
CI01000304_08692093_08712203 NA coding upstream 235178 8691959 ~ 8712203 (-)
G423501 NA non-coding downstream 20844 8435266 ~ 8435602 (-)
G423496 NA non-coding downstream 29415 8426823 ~ 8427031 (-)
G423474 NA non-coding downstream 65684 8390536 ~ 8390762 (-)
G423472 NA non-coding downstream 66412 8389819 ~ 8390034 (-)
G423454 NA non-coding downstream 133650 8317901 ~ 8322796 (-)
G423521 NA non-coding upstream 10259 8467040 ~ 8467272 (-)
G423524 NA non-coding upstream 16893 8473674 ~ 8473876 (-)
G423529 NA non-coding upstream 21401 8478182 ~ 8478664 (-)
G423551 NA non-coding upstream 57125 8513906 ~ 8514241 (-)
G423557 NA non-coding upstream 85679 8542460 ~ 8542686 (-)
G422810 NA other downstream 803743 7630159 ~ 7652703 (-)
G422378 NA other downstream 1673400 6744679 ~ 6783046 (-)
G422354 NA other downstream 1824947 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 1972951 6480743 ~ 6483986 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 3783499 4661766 ~ 4672947 (-)
G423386 NA other upstream 405442 8862223 ~ 8865296 (-)
CI01000304_09566730_09575706 NA other upstream 1111575 9566730 ~ 9575706 (-)
CI01000304_09737662_09738777 NA other upstream 1279965 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 1696665 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 1733793 10190574 ~ 10192357 (-)

Expression



Co-expression Network