G423254


Basic Information

Item Value
gene id G423254
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8598717 ~ 8599084 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU486077
GTTCAATACTTCTGTCAGGACATCTGACTGAGGCTAAATATAGTTAAATCGTTTTTTATATAATATAGTAAATATAAATATAGTTTTTTATAGCCTACTTATATGTACTGTAGGGTTCATTTAAAAAAACAAACAAAAAAAATGCCAAAATTGGCATTATACAGTATTAATGCAAAAAAAAAAAAAAAAAAAAGGCGTATTTTCGCATTAAAATCTTCAGCAGAATAGGTGCCAAAAGCAAAACACAAATTAAGTGTATCATCAGGATGTTTTATGTCAAAATGTTGAGAATTGTCTAACTAACTTCTCCCATACTTTTGGAAGTTTACTTCTACTTACTATCCGTAACGACTCACCTCCCTCTCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486077 True 368 lncRNA 0.30 1 8598717 8599084

Neighbor

gene id symbol gene type direction distance location
CI01000304_08582404_08594691 DMTN coding upstream 3833 8582404 ~ 8594884 (+)
CI01000304_08547909_08562342 XPO7 coding upstream 36113 8547909 ~ 8562604 (+)
CI01000304_08232073_08235598 NA coding upstream 363062 8231293 ~ 8235655 (+)
CI01000304_08222591_08229908 NA coding upstream 367770 8222591 ~ 8230947 (+)
CI01000304_08120416_08124549 LRRTM4L1 coding upstream 474120 8120416 ~ 8124597 (+)
CI01000304_08624038_08653167 PPP3CCA, PPP3CCB, PPP3CC, PP2BC coding downstream 24954 8624038 ~ 8653550 (+)
CI01000304_08671901_08672203 NA coding downstream 72720 8671770 ~ 8672555 (+)
CI01000304_08741397_08752689 NA coding downstream 142313 8741397 ~ 8752689 (+)
CI01000304_08864119_08871322 LETM2 coding downstream 264693 8863777 ~ 8871689 (+)
CI01000304_08878926_08892802 NA coding downstream 279842 8878926 ~ 8894049 (+)
G423252 NA non-coding upstream 56040 8542430 ~ 8542677 (+)
G423234 NA non-coding upstream 61851 8483902 ~ 8536866 (+)
G423243 NA non-coding upstream 76150 8521550 ~ 8522567 (+)
G423242 NA non-coding upstream 84460 8513906 ~ 8514257 (+)
G423202 NA non-coding upstream 121642 8476837 ~ 8477075 (+)
G423256 NA non-coding downstream 1365 8600449 ~ 8600652 (+)
G423315 NA non-coding downstream 262797 8861881 ~ 8862095 (+)
G423310 NA non-coding downstream 298898 8897982 ~ 8908476 (+)
G423318 NA non-coding downstream 305427 8904511 ~ 8905000 (+)
G423324 NA non-coding downstream 317334 8916418 ~ 8934956 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other upstream 617982 7979078 ~ 7980735 (+)
G421435 NA other upstream 1114029 7484141 ~ 7484688 (+)
CI01000304_07352697_07354032 NA other upstream 1244385 7352621 ~ 7354396 (+)
G421162 NA other upstream 2355720 6241233 ~ 6242997 (+)
G423614 NA other downstream 349952 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 965521 9561005 ~ 9565778 (+)
G424246 NA other downstream 1521315 10116343 ~ 10127322 (+)
G424251 NA other downstream 1589738 10188822 ~ 10189404 (+)

Expression


Co-expression Network