G423386


Basic Information

Item Value
gene id G423386
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8862223 ~ 8865296 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU486232
CCTCCTGGTGAGCTGCTGCCCGTGCAGTAACCTCCAGACCATCCTGCCCGCGATTTTGGTGTCGATGCCAAGAAGGCGGAAGCCATGATAGTAATGCTTGAGCTCATCCAGGACTTTCTGTCCCAGAGACTTCCTTGGCACTGCTGGGGGTGCTGGCGGTGGATGAGTGCCAGAGGCAGCCGGGACAGGGTCACCCTTTATGGGTTCAGAACCCGCAGCGGTGTCCTTGGCCTCTTGCAGCCAAGCACAAGAGCTGTGGAGGGGACGTGCAGCTACGCAACCGGGGCGGATCAAGCTGGATGTGTAACTTGGATACAGCGGCCTGGGGCACCTGGCTGTGACGGCAGCCCGTCCGAGGAACTCCGAATTGTAGCGTATGCATGCGGTCGATGGGAGTGAAGCACAGCCATGTCTTTTAGAAAGCAAGTAGGATCCTCTTGATCTTGTTACAGCGAGAAGCACCTGTGAGCTGAAAACTGCCATTTTGTGACTAACAATTGGGTATCCTGTGGAAAAAGATCCGTGTCGTGCGGTGTAATGGCTGTTATGCTGTAACCATTGGATATAGTGTCAGATCGGATGACGGTGGAGAAAAATGTTCGGCTCGACAGCGCTCCTCCTGCAGCTGAGGGTCAAATTTCCTCGGAGGCGATGGTACGGGAGAAAAACGGACCTTTTGCGGGATGTGATACTCCATTCACGACGGTATGTCACTCCTTAAATTTAAATCTAAATAGACTTATAAATTAATACATCCGAGCTGATGTACTGTTTTGATCGTATTTTAAAATGGACTGTCAGGTTGCCTCTGATACCCCAGTGAAGCCGACCGACCGCCCCACCGAGGAGGATCATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486232 True 857 TUCP 0.53 3 8862223 8865296

Neighbor

gene id symbol gene type direction distance location
CI01000304_08836330_08859572 WHSC1L1 coding downstream 1494 8835882 ~ 8860729 (-)
CI01000304_08829163_08833955 PLPP5 coding downstream 28268 8828785 ~ 8833955 (-)
CI01000304_08819813_08827793 DDHD2 coding downstream 34430 8818948 ~ 8827793 (-)
CI01000304_08789401_08798907 TACC1 coding downstream 63190 8789228 ~ 8799033 (-)
CI01000304_08754563_08783858 LOXL2A, LOXL2 coding downstream 78365 8753993 ~ 8783858 (-)
CI01000304_08899490_08900383 NA coding upstream 33865 8899161 ~ 8900772 (-)
CI01000304_08904762_08909795 NA coding upstream 39182 8904478 ~ 8910490 (-)
CI01000304_08913076_08936241 KCNIP3B, KCNIP3 coding upstream 47406 8912702 ~ 8936241 (-)
CI01000304_09046090_09129612 PCDH1 coding upstream 180794 9046090 ~ 9129612 (-)
CI01000304_09284328_09286980 AVD coding upstream 418893 9284189 ~ 9287032 (-)
G423589 NA non-coding downstream 189211 8672676 ~ 8673012 (-)
G423588 NA non-coding downstream 189643 8671798 ~ 8672580 (-)
G423557 NA non-coding downstream 319537 8542460 ~ 8542686 (-)
G423551 NA non-coding downstream 347982 8513906 ~ 8514241 (-)
G423529 NA non-coding downstream 383559 8478182 ~ 8478664 (-)
G423615 NA non-coding upstream 83748 8949044 ~ 8949311 (-)
G423960 NA non-coding upstream 142312 9007608 ~ 9008693 (-)
G423972 NA non-coding upstream 172317 9037613 ~ 9098217 (-)
G424004 NA non-coding upstream 296506 9161802 ~ 9162014 (-)
G424006 NA non-coding upstream 299222 9164518 ~ 9164832 (-)
G422810 NA other downstream 1209520 7630159 ~ 7652703 (-)
G422378 NA other downstream 2079177 6744679 ~ 6783046 (-)
G422354 NA other downstream 2230724 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 2378728 6480743 ~ 6483986 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 4189276 4661766 ~ 4672947 (-)
CI01000304_09566730_09575706 NA other upstream 703060 9566730 ~ 9575706 (-)
CI01000304_09737662_09738777 NA other upstream 871450 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 1288150 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 1325278 10190574 ~ 10192357 (-)
G424808 NA other upstream 1579059 10444355 ~ 10542665 (-)

Expression


Co-expression Network