Gene
RNA
| Item | Value |
|---|---|
| gene id | G423615 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 8949044 ~ 8949311 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU486478 | True | 268 | lncRNA | 0.52 | 1 | 8949044 | 8949311 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_08913076_08936241 | KCNIP3B, KCNIP3 | coding | downstream | 12803 | 8912702 ~ 8936241 (-) |
| CI01000304_08904762_08909795 | NA | coding | downstream | 38554 | 8904478 ~ 8910490 (-) |
| CI01000304_08899490_08900383 | NA | coding | downstream | 48272 | 8899161 ~ 8900772 (-) |
| CI01000304_08836330_08859572 | WHSC1L1 | coding | downstream | 88315 | 8835882 ~ 8860729 (-) |
| CI01000304_08829163_08833955 | PLPP5 | coding | downstream | 115089 | 8828785 ~ 8833955 (-) |
| CI01000304_09046090_09129612 | PCDH1 | coding | upstream | 96779 | 9046090 ~ 9129612 (-) |
| CI01000304_09284328_09286980 | AVD | coding | upstream | 334878 | 9284189 ~ 9287032 (-) |
| CI01000304_09342385_09345935 | NA | coding | upstream | 392543 | 9341854 ~ 9345935 (-) |
| CI01000304_09508090_09519201 | NA | coding | upstream | 557986 | 9507297 ~ 9519333 (-) |
| CI01000304_09566730_09575706 | NA | coding | upstream | 617419 | 9566730 ~ 9575706 (-) |
| G423589 | NA | non-coding | downstream | 276032 | 8672676 ~ 8673012 (-) |
| G423588 | NA | non-coding | downstream | 276464 | 8671798 ~ 8672580 (-) |
| G423557 | NA | non-coding | downstream | 406358 | 8542460 ~ 8542686 (-) |
| G423551 | NA | non-coding | downstream | 434803 | 8513906 ~ 8514241 (-) |
| G423529 | NA | non-coding | downstream | 470380 | 8478182 ~ 8478664 (-) |
| G423960 | NA | non-coding | upstream | 58297 | 9007608 ~ 9008693 (-) |
| G423972 | NA | non-coding | upstream | 88302 | 9037613 ~ 9098217 (-) |
| G424004 | NA | non-coding | upstream | 212491 | 9161802 ~ 9162014 (-) |
| G424006 | NA | non-coding | upstream | 215207 | 9164518 ~ 9164832 (-) |
| G424008 | NA | non-coding | upstream | 216830 | 9166141 ~ 9166543 (-) |
| G423386 | NA | other | downstream | 83748 | 8862223 ~ 8865296 (-) |
| G422810 | NA | other | downstream | 1296341 | 7630159 ~ 7652703 (-) |
| G422378 | NA | other | downstream | 2165998 | 6744679 ~ 6783046 (-) |
| G422354 | NA | other | downstream | 2317545 | 6631086 ~ 6631499 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | downstream | 2465549 | 6480743 ~ 6483986 (-) |
| CI01000304_09737662_09738777 | NA | other | upstream | 787435 | 9736746 ~ 9738777 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | upstream | 1204135 | 10160458 ~ 10163762 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | upstream | 1241263 | 10190574 ~ 10192357 (-) |
| G424808 | NA | other | upstream | 1495044 | 10444355 ~ 10542665 (-) |
