G423672


Basic Information

Item Value
gene id G423672
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9128823 ~ 9134354 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU486535
GTAACACAGAGTGTCCGATTGGGCTGTTCTCTGCAACCTCTGCTTCGTAGGAGGATTTTTCAAACGTGGGTGCATTGTCGTTGGCATCAGCAATGACAACCCTCAGCAAGGCACTGCTGTAGCGAGGTGGATTGCCTCCATCCACAGCTTTGATGGTGAGGTCATAGGAGTCTTTCAGCTCTCGATCAAGACTTCCCAACACAATGAGTTGAGGCAATTTTTCACCTCGGTCCTCTGCAACTTGCAGACCAAAGAGTGCTACAGCCTCTGGTCCTGCCGTTAAGGTGTAGTCAGCTACTCCATTCCTCTCTGTATCTTTGTCAGTGGCCAGTGGAATTGAAAAGAGTGACCCCATGTGGGTGTTCTCTGGAACTGAGAGGGTAAGGACAGGTGAGGGGAATTGTGGTGTATTATCATTGATATCCTGCACCTCGATCCTTCCCTCTATCAGCCGTGGACTCTGATTTTGAATAAGGTCTGTGACGGACACCTCAAACTCCAGGAAGCAGGGCTTGCCTTTATTACGACAATCCTTCAGTGTCTCTCTGTCTATGGGGATCTCAGTGGTAAAGATATCTCCAGTTTTGCCATCCACCCGCAGATAGGGAGCGCCCACCTCCAGTTTGTACAGGTGTCCAGTGTCTGGTAGCCCCTGGTCAGCCGCCAGGCTGCCAATCAGTGTGCTTGGAGGCTGTTCCTCATGTACGCGGTATAGAATGCCTCCCACCGCACCACTCAGCAAGTCCAGTAACAGTCCCCACAGCAGAAACAACACCACAGGGAGATCCATGGGCCCTCAGAGAGGTAACACCTCAGTCTTCGTCGATCACTTTTTCCTGCCAAGACCGAGGCTTCTTGTCTGAGGATCAACTACAGCTGATGTTTCCTTCGAGGTTTACACGGACCCCTAAACACCTGATTTAAAGAATCCAGACATCAAGAAAACATAAAATCCTTCCGTTGGAAAACAATCCATAAGTAGCCGAGCTATTTTCCACGCCATTCCCACGACTCCGCGTCAGTTTGATAACATCGGCACTCATTTAAGTGATAATGAATGAGAAATTACGGCTGATGATGGCTGTTCAAATGTCTTTGCTGTTGTTTCTCAACACAGAAACGCTTCTAAAACGAGCAACTTCCCCCGTTTCAGTCCATAAATCCTCAAACACTCATTTTAGGAGAGTACAGCTTCTCACAAAATTTGATAGTGCTCCTCGTTATTTTTACGGAATGATAGCATAATCTACCGGAAATAATGTAAAAATGTAACAGTACATGGCAGAACGTATGGATTCTTCTCCGCACAGGGTTAATCCTGCATTTCTATGCATGTGAGAGAGTGAGTGGAGAGATTTCTCAGCACCGCGCGCTGTTCCCCTCTAGAAGCGCGCGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486535 True 1398 lncRNA 0.48 3 9128823 9134354

Neighbor

gene id symbol gene type direction distance location
CI01000304_09030903_09042018 NA coding upstream 86782 9030566 ~ 9042041 (+)
CI01000304_08895917_08897236 NA coding upstream 231291 8895603 ~ 8897532 (+)
CI01000304_08878926_08892802 NA coding upstream 234774 8878926 ~ 8894049 (+)
CI01000304_08864119_08871322 LETM2 coding upstream 257134 8863777 ~ 8871689 (+)
CI01000304_08741397_08752689 NA coding upstream 376134 8741397 ~ 8752689 (+)
CI01000304_09178746_09214392 NA coding downstream 44320 9178674 ~ 9215108 (+)
CI01000304_09298662_09308685 TRPC7B, TRPC7, TRPC7A coding downstream 164228 9298582 ~ 9308867 (+)
CI01000304_09310530_09315160 NA coding downstream 176176 9310530 ~ 9315193 (+)
CI01000304_09325707_09339195 FBXW11A, FBXW11B, FBXW11 coding downstream 191353 9325707 ~ 9339741 (+)
CI01000304_09359193_09364869 NA coding downstream 224743 9359097 ~ 9365174 (+)
G423670 NA non-coding upstream 560 9070089 ~ 9128263 (+)
G423681 NA non-coding upstream 60054 9065098 ~ 9068769 (+)
G423649 NA non-coding upstream 120124 9007995 ~ 9008699 (+)
G423324 NA non-coding upstream 193867 8916418 ~ 8934956 (+)
G423310 NA non-coding upstream 220347 8897982 ~ 8908476 (+)
G423696 NA non-coding downstream 27367 9161721 ~ 9162080 (+)
G423707 NA non-coding downstream 59951 9194305 ~ 9194526 (+)
G423724 NA non-coding downstream 92143 9226497 ~ 9226933 (+)
G423725 NA non-coding downstream 92623 9226977 ~ 9227317 (+)
G423774 NA non-coding downstream 116853 9251207 ~ 9251407 (+)
G423614 NA other upstream 179401 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 456268 8671770 ~ 8672555 (+)
CI01000304_08232073_08235598 NA other upstream 893863 8231293 ~ 8235655 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other upstream 1148088 7979078 ~ 7980735 (+)
G421435 NA other upstream 1644135 7484141 ~ 7484688 (+)
CI01000304_09564068_09565679 HRH2B other downstream 430251 9561005 ~ 9565778 (+)
G424246 NA other downstream 986045 10116343 ~ 10127322 (+)
G424251 NA other downstream 1054468 10188822 ~ 10189404 (+)
CI01000304_10555326_10571933 NA other downstream 1420932 10555216 ~ 10572164 (+)
G425718 NA other downstream 3294351 12436554 ~ 12436605 (+)

Expression


Co-expression Network