Gene
RNA
| Item | Value |
|---|---|
| gene id | G424016 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 9193299 ~ 9193528 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU486910 | True | 230 | lncRNA | 0.34 | 1 | 9193299 | 9193528 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_09046090_09129612 | PCDH1 | coding | downstream | 63687 | 9046090 ~ 9129612 (-) |
| CI01000304_08913076_08936241 | KCNIP3B, KCNIP3 | coding | downstream | 257058 | 8912702 ~ 8936241 (-) |
| CI01000304_08904762_08909795 | NA | coding | downstream | 282809 | 8904478 ~ 8910490 (-) |
| CI01000304_08899490_08900383 | NA | coding | downstream | 292527 | 8899161 ~ 8900772 (-) |
| CI01000304_08836330_08859572 | WHSC1L1 | coding | downstream | 332570 | 8835882 ~ 8860729 (-) |
| CI01000304_09284328_09286980 | AVD | coding | upstream | 90661 | 9284189 ~ 9287032 (-) |
| CI01000304_09342385_09345935 | NA | coding | upstream | 148326 | 9341854 ~ 9345935 (-) |
| CI01000304_09508090_09519201 | NA | coding | upstream | 313769 | 9507297 ~ 9519333 (-) |
| CI01000304_09566730_09575706 | NA | coding | upstream | 373202 | 9566730 ~ 9575706 (-) |
| CI01000304_09577749_09578512 | NA | coding | upstream | 382591 | 9576119 ~ 9578512 (-) |
| G424008 | NA | non-coding | downstream | 26756 | 9166141 ~ 9166543 (-) |
| G424006 | NA | non-coding | downstream | 28467 | 9164518 ~ 9164832 (-) |
| G424004 | NA | non-coding | downstream | 31285 | 9161802 ~ 9162014 (-) |
| G423972 | NA | non-coding | downstream | 95082 | 9037613 ~ 9098217 (-) |
| G423960 | NA | non-coding | downstream | 184606 | 9007608 ~ 9008693 (-) |
| G424025 | NA | non-coding | upstream | 13955 | 9207483 ~ 9207694 (-) |
| G424033 | NA | non-coding | upstream | 22900 | 9216428 ~ 9216638 (-) |
| G424075 | NA | non-coding | upstream | 62380 | 9255908 ~ 9256347 (-) |
| G424079 | NA | non-coding | upstream | 70005 | 9263533 ~ 9263743 (-) |
| G424088 | NA | non-coding | upstream | 99168 | 9292696 ~ 9293123 (-) |
| G423386 | NA | other | downstream | 328003 | 8862223 ~ 8865296 (-) |
| G422810 | NA | other | downstream | 1540596 | 7630159 ~ 7652703 (-) |
| G422378 | NA | other | downstream | 2410253 | 6744679 ~ 6783046 (-) |
| G422354 | NA | other | downstream | 2561800 | 6631086 ~ 6631499 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | downstream | 2709804 | 6480743 ~ 6483986 (-) |
| CI01000304_09737662_09738777 | NA | other | upstream | 543218 | 9736746 ~ 9738777 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | upstream | 959918 | 10160458 ~ 10163762 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | upstream | 997046 | 10190574 ~ 10192357 (-) |
| G424808 | NA | other | upstream | 1250827 | 10444355 ~ 10542665 (-) |
