Gene
RNA
| Item | Value |
|---|---|
| gene id | G424079 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 9263533 ~ 9263743 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| putative uncharacterized protein DDB_G0281733 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU486979 | True | 211 | lncRNA | 0.42 | 1 | 9263533 | 9263743 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_09046090_09129612 | PCDH1 | coding | downstream | 133921 | 9046090 ~ 9129612 (-) |
| CI01000304_08913076_08936241 | KCNIP3B, KCNIP3 | coding | downstream | 327292 | 8912702 ~ 8936241 (-) |
| CI01000304_08904762_08909795 | NA | coding | downstream | 353043 | 8904478 ~ 8910490 (-) |
| CI01000304_08899490_08900383 | NA | coding | downstream | 362761 | 8899161 ~ 8900772 (-) |
| CI01000304_08836330_08859572 | WHSC1L1 | coding | downstream | 402804 | 8835882 ~ 8860729 (-) |
| CI01000304_09284328_09286980 | AVD | coding | upstream | 20446 | 9284189 ~ 9287032 (-) |
| CI01000304_09342385_09345935 | NA | coding | upstream | 78111 | 9341854 ~ 9345935 (-) |
| CI01000304_09508090_09519201 | NA | coding | upstream | 243554 | 9507297 ~ 9519333 (-) |
| CI01000304_09566730_09575706 | NA | coding | upstream | 302987 | 9566730 ~ 9575706 (-) |
| CI01000304_09577749_09578512 | NA | coding | upstream | 312376 | 9576119 ~ 9578512 (-) |
| G424075 | NA | non-coding | downstream | 7186 | 9255908 ~ 9256347 (-) |
| G424033 | NA | non-coding | downstream | 46895 | 9216428 ~ 9216638 (-) |
| G424025 | NA | non-coding | downstream | 55839 | 9207483 ~ 9207694 (-) |
| G424016 | NA | non-coding | downstream | 70005 | 9193299 ~ 9193528 (-) |
| G424008 | NA | non-coding | downstream | 96990 | 9166141 ~ 9166543 (-) |
| G424088 | NA | non-coding | upstream | 28953 | 9292696 ~ 9293123 (-) |
| G424089 | NA | non-coding | upstream | 32101 | 9295844 ~ 9296066 (-) |
| G424091 | NA | non-coding | upstream | 38088 | 9301831 ~ 9302281 (-) |
| G424051 | NA | non-coding | upstream | 52916 | 9316659 ~ 9374445 (-) |
| G424054 | NA | non-coding | upstream | 64591 | 9328334 ~ 9331490 (-) |
| G423386 | NA | other | downstream | 398237 | 8862223 ~ 8865296 (-) |
| G422810 | NA | other | downstream | 1610830 | 7630159 ~ 7652703 (-) |
| G422378 | NA | other | downstream | 2480487 | 6744679 ~ 6783046 (-) |
| G422354 | NA | other | downstream | 2632034 | 6631086 ~ 6631499 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | downstream | 2780038 | 6480743 ~ 6483986 (-) |
| CI01000304_09737662_09738777 | NA | other | upstream | 473003 | 9736746 ~ 9738777 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | upstream | 889703 | 10160458 ~ 10163762 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | upstream | 926831 | 10190574 ~ 10192357 (-) |
| G424808 | NA | other | upstream | 1180612 | 10444355 ~ 10542665 (-) |
