G423803


Basic Information

Item Value
gene id G423803
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9292803 ~ 9293163 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU486684
ACATTTCAAAAGTTTTTTTTTTAAATTTTGATGATTAGAGCGTACAGCTCATGAAAGTCCAAAATCCAGTATTTCAAAATATTAGAATATTTCCTAAAATCAATCAAAAAATGGATTTGCAAAACAGAAAAGTTCAAGTTCTTTAAAGTATGTTCTTTTGTGCACTCAATACTTGATCGGCAGGACATATTACAGCAAATGACTTGCTCCTAGCACAAATTACTGCATCAGTGAAGTGTGGCATGGAAGTGATCAGCCTGTGGCACTGCTGAGGCACTATTGAGCCTTCAGATCATCTGTATATTGTTGGATCGACTGTTTCTCATCTTTCTCTTGAAAATATCCCATAGATTCAGGTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486684 True 361 lncRNA 0.35 1 9292803 9293163

Neighbor

gene id symbol gene type direction distance location
CI01000304_09178746_09214392 NA coding upstream 77695 9178674 ~ 9215108 (+)
CI01000304_09030903_09042018 NA coding upstream 250762 9030566 ~ 9042041 (+)
CI01000304_08895917_08897236 NA coding upstream 395271 8895603 ~ 8897532 (+)
CI01000304_08878926_08892802 NA coding upstream 398754 8878926 ~ 8894049 (+)
CI01000304_08864119_08871322 LETM2 coding upstream 421114 8863777 ~ 8871689 (+)
CI01000304_09298662_09308685 TRPC7B, TRPC7, TRPC7A coding downstream 5419 9298582 ~ 9308867 (+)
CI01000304_09310530_09315160 NA coding downstream 17367 9310530 ~ 9315193 (+)
CI01000304_09325707_09339195 FBXW11A, FBXW11B, FBXW11 coding downstream 32544 9325707 ~ 9339741 (+)
CI01000304_09359193_09364869 NA coding downstream 65934 9359097 ~ 9365174 (+)
CI01000304_09367881_09372547 NA coding downstream 74308 9367471 ~ 9374245 (+)
G423747 NA non-coding upstream 5354 9284128 ~ 9287449 (+)
G423799 NA non-coding upstream 11370 9281232 ~ 9281433 (+)
G423779 NA non-coding upstream 36637 9255933 ~ 9256166 (+)
G423774 NA non-coding upstream 41396 9251207 ~ 9251407 (+)
G423725 NA non-coding upstream 65486 9226977 ~ 9227317 (+)
G423809 NA non-coding downstream 9666 9302829 ~ 9303076 (+)
G423753 NA non-coding downstream 35890 9329053 ~ 9329639 (+)
CI01000304_09457224_09468602 PCDH1G18 non-coding downstream 166689 9457068 ~ 9468909 (+)
G423826 NA non-coding downstream 224708 9517871 ~ 9518357 (+)
G423843 NA non-coding downstream 227319 9520482 ~ 9520813 (+)
G423614 NA other upstream 343381 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 620248 8671770 ~ 8672555 (+)
CI01000304_08232073_08235598 NA other upstream 1057843 8231293 ~ 8235655 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other upstream 1312068 7979078 ~ 7980735 (+)
G421435 NA other upstream 1808115 7484141 ~ 7484688 (+)
CI01000304_09564068_09565679 HRH2B other downstream 271442 9561005 ~ 9565778 (+)
G424246 NA other downstream 827236 10116343 ~ 10127322 (+)
G424251 NA other downstream 895659 10188822 ~ 10189404 (+)
CI01000304_10555326_10571933 NA other downstream 1262123 10555216 ~ 10572164 (+)
G425718 NA other downstream 3135542 12436554 ~ 12436605 (+)

Expression


Co-expression Network