G423809


Basic Information

Item Value
gene id G423809
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9302829 ~ 9303076 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU486690
ACTAAAATAACTAGCTTCCGGCAGATGACCTTACGCATAGTGTGCAAGTCGACTTGCGCCAAATGAGTAACCTCTGAAGCAATGTATGATGTAGGATGTAGGAGTATCGTAAGCTTAGACACCTCTCACAGTTTAAACAAATAGGGCTGGGCAAGAAACTCAAGCTCCTCTTCTCTTATATCGAAATCCTCTGACATTTCCCTTGAAATTTCTTGTTTTAGACTTCTAATTCATGACCGGTGTTTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486690 True 248 lncRNA 0.41 1 9302829 9303076

Neighbor

gene id symbol gene type direction distance location
CI01000304_09178746_09214392 NA coding upstream 87721 9178674 ~ 9215108 (+)
CI01000304_09030903_09042018 NA coding upstream 260788 9030566 ~ 9042041 (+)
CI01000304_08895917_08897236 NA coding upstream 405297 8895603 ~ 8897532 (+)
CI01000304_08878926_08892802 NA coding upstream 408780 8878926 ~ 8894049 (+)
CI01000304_08864119_08871322 LETM2 coding upstream 431140 8863777 ~ 8871689 (+)
CI01000304_09310530_09315160 NA coding downstream 7454 9310530 ~ 9315193 (+)
CI01000304_09325707_09339195 FBXW11A, FBXW11B, FBXW11 coding downstream 22631 9325707 ~ 9339741 (+)
CI01000304_09359193_09364869 NA coding downstream 56021 9359097 ~ 9365174 (+)
CI01000304_09367881_09372547 NA coding downstream 64395 9367471 ~ 9374245 (+)
CI01000304_09380606_09383014 PCDH1A3, PCDH1A4 coding downstream 77530 9380606 ~ 9383014 (+)
G423803 NA non-coding upstream 9666 9292803 ~ 9293163 (+)
G423747 NA non-coding upstream 15380 9284128 ~ 9287449 (+)
G423799 NA non-coding upstream 21396 9281232 ~ 9281433 (+)
G423779 NA non-coding upstream 46663 9255933 ~ 9256166 (+)
G423774 NA non-coding upstream 51422 9251207 ~ 9251407 (+)
G423753 NA non-coding downstream 25977 9329053 ~ 9329639 (+)
CI01000304_09457224_09468602 PCDH1G18 non-coding downstream 156776 9457068 ~ 9468909 (+)
G423826 NA non-coding downstream 214795 9517871 ~ 9518357 (+)
G423843 NA non-coding downstream 217406 9520482 ~ 9520813 (+)
G423848 NA non-coding downstream 224900 9527976 ~ 9528197 (+)
G423614 NA other upstream 353407 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 630274 8671770 ~ 8672555 (+)
CI01000304_08232073_08235598 NA other upstream 1067869 8231293 ~ 8235655 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other upstream 1322094 7979078 ~ 7980735 (+)
G421435 NA other upstream 1818141 7484141 ~ 7484688 (+)
CI01000304_09564068_09565679 HRH2B other downstream 261529 9561005 ~ 9565778 (+)
G424246 NA other downstream 817323 10116343 ~ 10127322 (+)
G424251 NA other downstream 885746 10188822 ~ 10189404 (+)
CI01000304_10555326_10571933 NA other downstream 1252210 10555216 ~ 10572164 (+)
G425718 NA other downstream 3125629 12436554 ~ 12436605 (+)

Expression


Co-expression Network