G424060


Basic Information

Item Value
gene id G424060
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9461133 ~ 9475049 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU486960
NNNNNCGATTAGATATTTCAGATACATCCAAACCGAGATCTTTAGCTACATTTCCAACAATAGATCCCTCCTTCAGCTCCTCGGGTATTGTATAACGAANNNNNNCAATGTACTCACTGCTGTCCGCGGTGAAAACACGCGCTTTTCCTGAAATCAGTCTCTTCGGCTCAAGCCCAAGGTCCGAGGCAATATTTCCAACAAACGAGCCCACCGACATTTCCTCGGGTATAGAATAACGAATCTGTCCGCTCACGCGAGAGGAAAATAAAGCCAGCGCGCATACTGTATAGAAGAAGAGCGACCCATGTAACCATCCTTTTCCTCCTGACTCCATTTTTGGTCAACAATGATCCAGCAAAAGCATTTAAAATAGCAAAATGTGCGATCAGTTATATGTTTCCAGCAATCTGCGTCTTCGTTCGGGTTATAGAATCTGGAGACCAAACTGAACTCGATTTGGTGGTCTGTTATGCAGCATCCAATGTTAGTTGTTGATGCTGTCTGAATTATGCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486960 True 515 lncRNA 0.43 3 9461133 9475049

Neighbor

gene id symbol gene type direction distance location
CI01000304_09342385_09345935 NA coding downstream 115198 9341854 ~ 9345935 (-)
CI01000304_09284328_09286980 AVD coding downstream 174101 9284189 ~ 9287032 (-)
CI01000304_09046090_09129612 PCDH1 coding downstream 331521 9046090 ~ 9129612 (-)
CI01000304_08913076_08936241 KCNIP3B, KCNIP3 coding downstream 524892 8912702 ~ 8936241 (-)
CI01000304_08904762_08909795 NA coding downstream 550643 8904478 ~ 8910490 (-)
CI01000304_09508090_09519201 NA coding upstream 32248 9507297 ~ 9519333 (-)
CI01000304_09566730_09575706 NA coding upstream 91681 9566730 ~ 9575706 (-)
CI01000304_09577749_09578512 NA coding upstream 101070 9576119 ~ 9578512 (-)
CI01000304_09609674_09619712 NA coding upstream 134461 9609510 ~ 9620030 (-)
CI01000304_09622805_09640521 NA coding upstream 147327 9622376 ~ 9640540 (-)
G424106 NA non-coding downstream 1382 9360776 ~ 9459751 (-)
G424071 NA non-coding downstream 10708 9443332 ~ 9450425 (-)
G424072 NA non-coding downstream 11302 9442404 ~ 9449831 (-)
G424123 NA non-coding downstream 42946 9415420 ~ 9418187 (-)
G424110 NA non-coding downstream 60823 9380492 ~ 9400310 (-)
G424052 NA non-coding upstream 23958 9499007 ~ 9503311 (-)
G424158 NA non-coding upstream 45094 9520143 ~ 9520401 (-)
G424162 NA non-coding upstream 54634 9529683 ~ 9531324 (-)
G424181 NA non-coding upstream 87673 9562722 ~ 9563089 (-)
G424187 NA non-coding upstream 170448 9645497 ~ 9645723 (-)
G423386 NA other downstream 595837 8862223 ~ 8865296 (-)
G422810 NA other downstream 1808430 7630159 ~ 7652703 (-)
G422378 NA other downstream 2678087 6744679 ~ 6783046 (-)
G422354 NA other downstream 2829634 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 2977638 6480743 ~ 6483986 (-)
CI01000304_09737662_09738777 NA other upstream 261697 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 678397 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 715525 10190574 ~ 10192357 (-)
G424808 NA other upstream 969306 10444355 ~ 10542665 (-)

Expression


Co-expression Network