Gene
RNA
| Item | Value |
|---|---|
| gene id | G424158 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 9520143 ~ 9520401 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU487062 | True | 259 | lncRNA | 0.33 | 1 | 9520143 | 9520401 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_09508090_09519201 | NA | coding | downstream | 810 | 9507297 ~ 9519333 (-) |
| CI01000304_09342385_09345935 | NA | coding | downstream | 174208 | 9341854 ~ 9345935 (-) |
| CI01000304_09284328_09286980 | AVD | coding | downstream | 233111 | 9284189 ~ 9287032 (-) |
| CI01000304_09046090_09129612 | PCDH1 | coding | downstream | 390531 | 9046090 ~ 9129612 (-) |
| CI01000304_08913076_08936241 | KCNIP3B, KCNIP3 | coding | downstream | 583902 | 8912702 ~ 8936241 (-) |
| CI01000304_09566730_09575706 | NA | coding | upstream | 46329 | 9566730 ~ 9575706 (-) |
| CI01000304_09577749_09578512 | NA | coding | upstream | 55718 | 9576119 ~ 9578512 (-) |
| CI01000304_09609674_09619712 | NA | coding | upstream | 89109 | 9609510 ~ 9620030 (-) |
| CI01000304_09622805_09640521 | NA | coding | upstream | 101975 | 9622376 ~ 9640540 (-) |
| CI01000304_09699524_09703985 | TLX3B | coding | upstream | 178967 | 9699368 ~ 9706659 (-) |
| G424066 | NA | non-coding | downstream | 15382 | 9441337 ~ 9504761 (-) |
| G424052 | NA | non-coding | downstream | 16832 | 9499007 ~ 9503311 (-) |
| G424065 | NA | non-coding | downstream | 22550 | 9471070 ~ 9497593 (-) |
| G424060 | NA | non-coding | downstream | 45094 | 9461133 ~ 9475049 (-) |
| G424055 | NA | non-coding | downstream | 53821 | 9452142 ~ 9466322 (-) |
| G424162 | NA | non-coding | upstream | 9282 | 9529683 ~ 9531324 (-) |
| G424181 | NA | non-coding | upstream | 42321 | 9562722 ~ 9563089 (-) |
| G424187 | NA | non-coding | upstream | 125096 | 9645497 ~ 9645723 (-) |
| G424188 | NA | non-coding | upstream | 125413 | 9645814 ~ 9646065 (-) |
| G424190 | NA | non-coding | upstream | 129260 | 9649661 ~ 9649877 (-) |
| G423386 | NA | other | downstream | 654847 | 8862223 ~ 8865296 (-) |
| G422810 | NA | other | downstream | 1867440 | 7630159 ~ 7652703 (-) |
| G422378 | NA | other | downstream | 2737097 | 6744679 ~ 6783046 (-) |
| G422354 | NA | other | downstream | 2888644 | 6631086 ~ 6631499 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | downstream | 3036648 | 6480743 ~ 6483986 (-) |
| CI01000304_09737662_09738777 | NA | other | upstream | 216345 | 9736746 ~ 9738777 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | upstream | 633045 | 10160458 ~ 10163762 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | upstream | 670173 | 10190574 ~ 10192357 (-) |
| G424808 | NA | other | upstream | 923954 | 10444355 ~ 10542665 (-) |
