G423877


Basic Information

Item Value
gene id G423877
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9660434 ~ 9660844 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU486765
GTTTAACAGAGGCACTTTAATTGACTTTTAATGGAGAGATAAGCTGGGACCAGGAGAGACCAGAGCGGAACAGCACTGCATGTGTATGAGAGCAAAGTCCACCTGACTGCAGCGTCCCGGAGGTGTGTTTGAGTCTGTGTGAGCTTGAGCAGAGAGAGGCAGCCGCACAGACACACACACAGATGCAGAGGCATTCAGCACTTTTCAAGGGTCACACACGCACATTGGCACACACTTGGACGCACTTTCAGAAACACCTGGATTGAACTATCTCTAGAGATAGCAGTCAGCTTTCTTCCTACCATACGTCCTCTCTCTTTTGCTGTCCTTTCTGTCCTTTTCTTTGCACACAAGAACAAACACACAAATAGAAACATTTAGCTATGAACACATCCCTTTTTTTTCCCCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486765 True 411 lncRNA 0.46 1 9660434 9660844

Neighbor

gene id symbol gene type direction distance location
CI01000304_09564068_09565679 HRH2B coding upstream 94656 9561005 ~ 9565778 (+)
CI01000304_09532680_09535197 NA coding upstream 124003 9532680 ~ 9536431 (+)
CI01000304_09529802_09531061 NA coding upstream 129130 9529391 ~ 9531304 (+)
CI01000304_09494392_09503344 PCDH1G32 coding upstream 156846 9494392 ~ 9503588 (+)
CI01000304_09491577_09494024 PCDH1G31 coding upstream 166410 9491577 ~ 9494024 (+)
CI01000304_09683383_09690928 KCNIP1B, KCNIP1 coding downstream 22539 9683383 ~ 9690941 (+)
CI01000304_09692774_09694613 NA coding downstream 31930 9692774 ~ 9694613 (+)
CI01000304_09695997_09696577 NA coding downstream 35153 9695997 ~ 9697143 (+)
CI01000304_09757695_09760278 NA coding downstream 96249 9757093 ~ 9760699 (+)
CI01000304_09879900_09938234 NLGN2, NLGN2A, NLGN2B coding downstream 219010 9879854 ~ 9939321 (+)
G423876 NA non-coding upstream 276 9659708 ~ 9660158 (+)
G423842 NA non-coding upstream 1162 9658246 ~ 9659272 (+)
G423841 NA non-coding upstream 51273 9579575 ~ 9609161 (+)
G423867 NA non-coding upstream 90161 9570018 ~ 9570273 (+)
G423836 NA non-coding upstream 93418 9566421 ~ 9567016 (+)
G423878 NA non-coding downstream 319 9661163 ~ 9661555 (+)
G423892 NA non-coding downstream 53217 9714061 ~ 9714287 (+)
G424323 NA non-coding downstream 401590 10062434 ~ 10062747 (+)
G424326 NA non-coding downstream 405251 10066095 ~ 10066360 (+)
G424277 NA non-coding downstream 454490 10115334 ~ 10115681 (+)
G423614 NA other upstream 711012 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 987879 8671770 ~ 8672555 (+)
CI01000304_08232073_08235598 NA other upstream 1425474 8231293 ~ 8235655 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other upstream 1679699 7979078 ~ 7980735 (+)
G424246 NA other downstream 459555 10116343 ~ 10127322 (+)
G424251 NA other downstream 527978 10188822 ~ 10189404 (+)
CI01000304_10555326_10571933 NA other downstream 894442 10555216 ~ 10572164 (+)
G425718 NA other downstream 2767861 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 3895607 13578049 ~ 13595097 (+)

Expression


Co-expression Network